| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2567 |
|---|
| Symbol | |
|---|
| ID | 3970943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2785884 |
|---|
| End bp | 2786549 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925677 |
|---|
| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| Protein accession | YP_532436 |
|---|
| Protein GI | 90424066 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.832478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATT TCTCGACCGC CCGACGGTTC ATGGTGGATG GTCAGATCCG GCCGAGCAGC
GTCACCGACT GGAGAATCAT CGACGCGATG CGCGCGGTGC CGCGCGAAGC CTTTGTGCCG
GAGAGCCAGA GCGCACTGGC CTATCTCGAC CTCGACCTCG ACGTCAGCGA AGCCGGTCCG
GTCAAACGCT ACCTGCTGAA ACCCGCGGTC ACCGCGCGAC TGCTGCAATC GGCCAATCTG
CAGCCGACCG ATCGTGTGTT GGTGGTCGGC TGTGCCACCG GCTATCTGCC GGCGATCGTC
GCCCGGCTTG TGGACCAGGT TGTCGCCACC GAGAGCGAAG CCAGCATGGC GGCCGAAGCC
AGCCAGATTC TCGGAACGCT CGGCGTCAGC AACGTCCGGG TGCAGCAGGC CGGCTCGGCC
GAGGGCTTTC CGGCCACCGC CCCTTACGAC GCCATCATTC TGAACGGCGC CACCGAACTC
GTGCCGCTTG AATTATACCG GCAACTCCAG GACGGCGGAC GGCTGGTTGG GGTGTTCGCG
CTCGGCCGCA CGCCGCGCGC GGAAATCGTG ACGCGGTCCG ACGACGACTT CGGCAGCCGG
CCGTTGTTCG ATACCTCGGT TCCGGTTCTG CCTGGGCTGG AACGCCCCAA GGGCTTCGTT
TTCTAA
|
|---|
| Protein sequence | MPDFSTARRF MVDGQIRPSS VTDWRIIDAM RAVPREAFVP ESQSALAYLD LDLDVSEAGP
VKRYLLKPAV TARLLQSANL QPTDRVLVVG CATGYLPAIV ARLVDQVVAT ESEASMAAEA
SQILGTLGVS NVRVQQAGSA EGFPATAPYD AIILNGATEL VPLELYRQLQ DGGRLVGVFA
LGRTPRAEIV TRSDDDFGSR PLFDTSVPVL PGLERPKGFV F
|
|---|
| |