Gene RPC_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2561 
Symbol 
ID3970935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2782664 
End bp2783395 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID637925669 
ProductDTW 
Protein accessionYP_532430 
Protein GI90424060 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0180989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA TTTCAGACCT GAACGCGGCC GAGGCGGCCG AGCCGATCCC GGAATGCCCG 
CGCTGCCAGA AGCCGGTGCC GCTGTGCATC TGCGACAGCA TCGTGCCGCT GGAGAACCGC
ACCAAGCTGT TGATCCTGCA GCATCCGCAG GAGCAGGACC GGGCGCTCGC CACCGCGCGG
CTGACCGCGC TGCATTTCCC CAACGCCGTG GTGCGGGTCG GGCTGTCCTG GCCGAGCCTG
TCGAAAGCCT GGGGCCAGCC GGTGCACGAT CCGTCGCGCT GGGCGGTGCT GTATCTTGGC
TCCGCCAAGG TCGCCGAGCT CGACACCGAC CGCGACATCG TGGCGATCGG CCGCAAGGGC
GAGGTCGAGG AGAATCAGCG CGCCATCCTC AAGGACATCG AAGGCGTGGT GCTGCTCGAC
GGCACCTGGA GCCAGGCCAA GGCGTTGTGG TGGCGCAACG CCTGGATGCT GAAATGCCAG
CGGGTGATTC TCGGCCCCAA GGCGCCGTCG CGCTACGGCA AGCTGCGCAA GGAGCCGCGC
CGCGACGGGC TGTCGACGCT GGAAGCCGCC GCGATGCTGA TCTCCGGGCT GGAGAAGCGC
CCGGACATCG AGGCGACGCT GCTGGGTGCC TTCGACCGCA TGCTGGCGCG CTTCCGCGAA
GTGCAGGCGA CGCTGCCGGA ATTGGCCCCG AAGCCGAAAA AGCGCGACTA CCGGCGCAAG
AAGCACGCCT GA
 
Protein sequence
MTKISDLNAA EAAEPIPECP RCQKPVPLCI CDSIVPLENR TKLLILQHPQ EQDRALATAR 
LTALHFPNAV VRVGLSWPSL SKAWGQPVHD PSRWAVLYLG SAKVAELDTD RDIVAIGRKG
EVEENQRAIL KDIEGVVLLD GTWSQAKALW WRNAWMLKCQ RVILGPKAPS RYGKLRKEPR
RDGLSTLEAA AMLISGLEKR PDIEATLLGA FDRMLARFRE VQATLPELAP KPKKRDYRRK
KHA