| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2560 |
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| Symbol | |
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| ID | 3970934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2779505 |
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| End bp | 2782609 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925668 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_532429 |
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| Protein GI | 90424059 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0478642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.875545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGC TGTCCGAACC GTTCATCAGA CGGCCGGTCG GCACCACGCT GCTGGCGATC
GGGTTGTTTC TGCTCGGGCT CGTGGCCTAC AAGTTTCTGC CGGTGGCGGC GGTGCCGAAC
GTCGATTTCC CGATGATCTT CGTGCAGGCC TCGCGGCCCG GCGCCGACCC CTCGGTGATG
GCGGCGACGG TGGCGGCCCC GCTGGAGCGC CGGCTCGGCG AGATCGCCGG CATCGACCAG
ATCACGTCGA CCAGTTCGCT GGGCTCGACC CGGATCCAGC TGCAATTTGC GATCGGCCGC
GACGTCGACC GCGCCGCGCG CGACGTTCAG GCTGCGATCA ACGCTTCGCT GAGTGATTTG
CCGACCGACC TGCCGACGCT GCCGAAATTC CGCAAGGCCA ATTCCGCGGC GTCGCCGGTG
TTTATTCTGG CGCTGACTTC GAAGACGATT CAGCCGAGCG CGATCTACGA CGTCGCCGAC
ACCGTGATCG CGCAGCGCAT CTCGCAGGTG CCGGGCGTCG GCGAGGTGAC GGTGTCCGGC
GCCGATCAGC CGGCGGTGCG CATCGCGCTC AACCCGGTGG CGCTGTCGAC CGCCAACATC
TCCACCGACG ACGTCCGCAC CGCGATCGTC AACGCCAATC CGCTGGGGCC GGTCGGCATT
TTCAACGGCG CGCGGCAGAG CGAGACGCTG TCGACCAACA AGCAGATGCG CACCGCCGCC
GAATTCCGCG ACATCGTGAT CAAGAGCAGC GGCGGCAATG TGCTGCGGCT GTCTGACGTC
GCCACCGTCG AGGACGCCAC CCGCTCGAGC CGATCGATCG CCTGGTTCAA CAAGCAGCCG
GCGGTGCTGA TCCAGATCAC CAAGCAGGGC GACGCCAACG TCATCGACAC CGTCGACCGG
GTCAAGGCGC TGCTGCCGGA ACTGAAGCAG TGGATTCCGG CCGGCGTCGA AATCTCCACG
CTGACCGACC GCACCGGCAC CATCCGCGCC AGCGTCGCCG ACATGCAATG GACGCTGCTC
GCCACCGCGG TGCTGGTGAT GGGGGTGGTG TTCGTGTTCC TGCGAAGGCT GACGCCGACC
ATCGCCGCCG GCGTCTCGGT GCCGCTGGCG CTGGCCGGCA CCTGCGCCGG AATGTGGCTG
GCCGGCTTCT CGATCAACAA CCTGTCGCTG ATGGCTTTGG CGATCTCGGT CGGTTTCGTG
GTCGACGACG CCATCGTGAT GATCGAGAAC ATGTACCGCA ATCTCGAGCG CGGCATGGCG
CCGCTGCAGG CGGCGCTCGA TGGCGCCAAA CAGATCGGCT TCACCGTGCT GTCGATCAGC
CTGTCGCTGG TGGCGGCGTT TACGCCGCTG ATCTTCATGG ACGGCATGGT CGGCCGGCTG
CTGCGCGAAT TCTCGCTGAC GCTCACCTTT GCGATTGCGG TGTCGACCGT GGTGTCGCTG
ACGGTGACGC CGATGATCTG CGCGCATTAC ATCCGTGGCG CGGTGTCGCA CAACGAGACC
TGGTTCGATC GCTTGATCGA GGGCGGGCTG TCGCGGCTGG TGAGTTTCTA CGCCACCACG
CTGCGCGCCG TGCTCGGCTA TCCCGGGCTG ACCATGCTGG TGTTCTTCGC CACCATCGCG
CTGACGGTGA CGCTCTATAT CAAGACCCCG AAGGGCTATT TCCCGACCGA CGATTCCGGC
TTCGTGATCG GCTCGACCCG CGCCTCGGCC GACGTCTCGT TCCAGGCGAT GAAGCAGATG
CAGCAGCAAC TTGCCGACAT CGTGATGGCC GATCCGGCGG TCGAAGGCAT CGGCTCGGCG
CTCGGCGGCG GCGGCGGGCC GGGCGGCGGC GGCTCCAATC GTGGCATGAT GTTCATCAGC
CTGAAGCCGA TCGAGCAGCG CGACGGCCTT TCAACCGAAA TGGTGATCAA CCGGCTGCGC
AAGAATCTCG GCGCGGTGGC CGGAATCCGG CTGTTCATGT TCGCAGCCCA AGACCTGCGC
ACCGGCGGTA GGCAGAGCGA TTCCGACTAT CAGTACACGC TGACCTCGAC CGACCTCAGC
CTGCTGCAGA CCTGGGCGCC GCTGGTCGGC AAGCGCATGG AGAGCGTCGA GGGCATCACC
GACGTCTCCA GCGATCGCGA TCCCGGCGGC TTGCAGCTGA CGCTGGCGAT CGACCGCAAT
GTCGCCTCGA GCTTAGGCGT CCGCGTCCAG GACATCGACA ACGCGCTCAA CAACGCGTTT
TCGCAGCGGC AGATTTCCAC CATCTACACC CAGCGCAACC AGTATCAGGT GGTGCTGGAG
ATCGACGCCA AATTCCAGAA CGATCCCTCC GACCTCGAAC GCATCTTCGT CGCGGGCGCC
GGCGGCGCGC AGATTCCGTT GTCTGCGCTG GTGCATACCA AGCGCGATCT GTCGCCGCTG
GCGGTGTATC ACTCGCAGTC GTTCCCCTCG ACCACGGTGT CGTTCAACCT GCAGCCCGAC
GTGCCGCTGC AGACCGCCAC CGCCAACATC CAGCGCGCGG TCGACGAATT GCACATGCCG
GAGGGCATTC GCGGCTCGTT CGACGGCAAT GCCGGCGACT TCGCCAAGAC CTCGTCGAAG
CAGCCGCTGC TGATCCTCGC AGCATTGGTG GCGATGTATA TCGTGCTCGG CGTGCTCTAT
GAGAGTTTGG CGCATCCGTT GACCATCATC TCGACGCTGC CGTCGGCCGG GCTCGGCGCG
CTGCTGGCGT TGCAGGTCAC CAACACGCCG CTGACCATCA TCGCCTTCGT CGGCATCATT
CTGTTGATCG GCATCGTCAA GAAGAACGGC ATCATGATGG TCGATTTCGC GCTGGAGGCC
GAGCGCAGCC GCGGGCTGTC CTCGGCGGAT GCGATCTTCG AGGCCTGCGT GGTCCGGTTC
CGGCCGATCC TGATGACCAC GATGGCGGCG CTGTTCGCCG GCATTCCGCT GGTGGTGGCG
ATCGGGCCCG GCACCGAGCT GCGCCGCCCG CTCGGCATCA CCATCATCGG CGGGTTGTTC
GTCTCGCAGA TCCTGACGCT GTACACCACG CCGGTGATCT ATCTGTTGAT CGACCGGCTG
CGGCGGCGCT GGAGCGGGGT GCCGGCGGCG GTGCCCGCAG AATAG
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| Protein sequence | MASLSEPFIR RPVGTTLLAI GLFLLGLVAY KFLPVAAVPN VDFPMIFVQA SRPGADPSVM
AATVAAPLER RLGEIAGIDQ ITSTSSLGST RIQLQFAIGR DVDRAARDVQ AAINASLSDL
PTDLPTLPKF RKANSAASPV FILALTSKTI QPSAIYDVAD TVIAQRISQV PGVGEVTVSG
ADQPAVRIAL NPVALSTANI STDDVRTAIV NANPLGPVGI FNGARQSETL STNKQMRTAA
EFRDIVIKSS GGNVLRLSDV ATVEDATRSS RSIAWFNKQP AVLIQITKQG DANVIDTVDR
VKALLPELKQ WIPAGVEIST LTDRTGTIRA SVADMQWTLL ATAVLVMGVV FVFLRRLTPT
IAAGVSVPLA LAGTCAGMWL AGFSINNLSL MALAISVGFV VDDAIVMIEN MYRNLERGMA
PLQAALDGAK QIGFTVLSIS LSLVAAFTPL IFMDGMVGRL LREFSLTLTF AIAVSTVVSL
TVTPMICAHY IRGAVSHNET WFDRLIEGGL SRLVSFYATT LRAVLGYPGL TMLVFFATIA
LTVTLYIKTP KGYFPTDDSG FVIGSTRASA DVSFQAMKQM QQQLADIVMA DPAVEGIGSA
LGGGGGPGGG GSNRGMMFIS LKPIEQRDGL STEMVINRLR KNLGAVAGIR LFMFAAQDLR
TGGRQSDSDY QYTLTSTDLS LLQTWAPLVG KRMESVEGIT DVSSDRDPGG LQLTLAIDRN
VASSLGVRVQ DIDNALNNAF SQRQISTIYT QRNQYQVVLE IDAKFQNDPS DLERIFVAGA
GGAQIPLSAL VHTKRDLSPL AVYHSQSFPS TTVSFNLQPD VPLQTATANI QRAVDELHMP
EGIRGSFDGN AGDFAKTSSK QPLLILAALV AMYIVLGVLY ESLAHPLTII STLPSAGLGA
LLALQVTNTP LTIIAFVGII LLIGIVKKNG IMMVDFALEA ERSRGLSSAD AIFEACVVRF
RPILMTTMAA LFAGIPLVVA IGPGTELRRP LGITIIGGLF VSQILTLYTT PVIYLLIDRL
RRRWSGVPAA VPAE
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