| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2551 |
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| Symbol | |
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| ID | 3970980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2765614 |
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| End bp | 2767113 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925659 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_532420 |
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| Protein GI | 90424050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0220695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.226636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG TTCCCGCCTC GTTCGTCCGC CAGGATCTGG TCGACAGCCG TCCGGCGCCG
GTGAAGACCA CCGGCTTCAC CGGCTTCATC CGCACCCGGC TGTTCAATAC GCCGACCAAC
GCCATCCTCA CCATCGTCGG GGCGGCGCTG CTGTGGCTGA CCATCGTGCC GACGGTCAAA
TTCCTGCTGA TCGACGCGGT CTGGCAGGGC ACCAGCCGCA CCGACTGCCT GGCCGCCGGT
GCCGGGCACG AGGTCGGCGC CTGCTGGCCG TTCGTGCAGG CGAAATTCGC GCAGTTCGTT
TACGGGTTCT ATCCGGAGCA GGAGCGCTGG CGGGTCAATC TGACCTTCGG CCTCGCGGCG
CTATTGCTGC TGCCGTTGCT GATTCCGCGG GTGCCGGCCA AGAGCCTGAA CGCCGGGCTG
TTCTTCGTCG CCTTCCCGGT GGTGGCGTTC TTCCTGCTGC ATGGCGGCGG GCTGCACGGC
TTCGCGCTGA GCTGGACCGC GGACTTGCTG TCGGGTTTCT CCGCCAGCGT CAGCGAGGCG
GGCAGCAAGC TCGCCGCCGG CGGCGGCGTG TCCTCGTTGT TGGGCTCGCT GATCTACGGC
TTCGGAACCG CGGTCTGGGT TCTGATCTGG CCGCTGAGCT GGCTGCGCGA TGCGATCCAG
GCTTCGGCGC GGCCGCTGTG GTTCGACTTC GTCTGCACCG CTGCGGTGGT CTCCGGCCTG
TTGTTCGTGC TGAACGGCGG CTTCCGCAAC GGCTGGCGGG CGCTGCTGCG CAGCCTGGCG
ATGTTCGCCG GCATCGCCGT GGTGATCTTC GTGATGCGGC TCGACCGCGG CGGGCTGCCG
ATCGTCGACA CACGGATGTG GGGCGGCCTG CTGGTGACGC TGGTGGTTTC GGTCACCGGC
ATCGTCACCT CGATGCCAGT CGGCATCGCG CTGGCGCTGG GGCGACGCTC GACGATTCCG
CTGATCCGGA TCTTCTCGGT CTTGTTCATC GAGTTCTGGC GCGGCGTGCC GCTGATCACC
GTATTGTTCT TCGCCACCTA CATGCTGCCG CTGTTCCTGC CCGGCAACTT CACCGTCGAC
GGCTTGGTGC GGGTGCTGAT CGGCATCGCG CTGTTCGCCG GTGCCTATAA CGCCGAGGTG
ATCCGCGGCG GCCTGCAGGC GATCCCGCGC GGCCAAGCCG AGGCGGCGAG CGCGCTCGGG
CTGTCGTATT GGAAGATCAC CGGCCTCGTG GTGATGCCGC AGGCGCTGCG CCACGTCATT
CCGGGTCTGG TCAACTCGTT CATCGCGCTG TTCAAGGACA CCTCGCTGGT GTCGATCGTG
GCGTTGTTCG ATCTGCTCGG CAGCCTGCGG GCGTCGTTCG CCGATCCGAC CTGGTCGACG
CCGACCACGC TGTTCACCGG CTTTGCCTTT ACCGGCATCG TGTATTTCGT GTTCTGCTTC
GGGATGTCGC GGTATTCGTT GTTCGTCGAA CACCGTCTCA ATGCCCACCG GCGCAGTTGA
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| Protein sequence | MTGVPASFVR QDLVDSRPAP VKTTGFTGFI RTRLFNTPTN AILTIVGAAL LWLTIVPTVK
FLLIDAVWQG TSRTDCLAAG AGHEVGACWP FVQAKFAQFV YGFYPEQERW RVNLTFGLAA
LLLLPLLIPR VPAKSLNAGL FFVAFPVVAF FLLHGGGLHG FALSWTADLL SGFSASVSEA
GSKLAAGGGV SSLLGSLIYG FGTAVWVLIW PLSWLRDAIQ ASARPLWFDF VCTAAVVSGL
LFVLNGGFRN GWRALLRSLA MFAGIAVVIF VMRLDRGGLP IVDTRMWGGL LVTLVVSVTG
IVTSMPVGIA LALGRRSTIP LIRIFSVLFI EFWRGVPLIT VLFFATYMLP LFLPGNFTVD
GLVRVLIGIA LFAGAYNAEV IRGGLQAIPR GQAEAASALG LSYWKITGLV VMPQALRHVI
PGLVNSFIAL FKDTSLVSIV ALFDLLGSLR ASFADPTWST PTTLFTGFAF TGIVYFVFCF
GMSRYSLFVE HRLNAHRRS
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