| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2550 |
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| Symbol | |
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| ID | 3970979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2764412 |
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| End bp | 2765617 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925658 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_532419 |
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| Protein GI | 90424049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.288222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.337272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG AGGCCCGCCC CCCGCCGACG CAGTTCGTTG CAAGACTGCG TCGGCTGCTG
GGCGGACGCG CCGGTTGGGG CGGACTGCTG CTGCAAGTGC TTTTCGTCGC CGCCCTGGTC
TGGGTGGCCT ACGAGATCGT CGACAACGCC CGCGGCAATC TCGCCAATCA GCGCATTGCC
TCGGGCTTCG GCTTCATGTC GCAGACCGCC GGATTCGGCG TCAGCCAGGC GCTGATTCCG
TATTCCGAAG CCGACTCCTA TACGCGGGTG TTTCTGGTCG GGCTGGTCAA CACGCTGGTG
GTGTCGATCA TCGGCATCAT CTTCGCCACC ATCATCGGCT TCATGGTGGC GCTGGGCCGG
CTGTCGCCGA ACTGGCTGTT GTCGAAGATT TCCGGCGGTT ACGTCGAATT GGTGCGCAAC
CTGCCGCTGT TGTTCCAGAT CCTGTTCTGG TACCTCGCGG TGCTCGGCAC CTTGCCGAGT
CCGCGGCAAA GCGTGTCGGT GTTCGACGCG TTTTTCCTCA GCAACCGCGG CATCGTAGTG
CCGAAACCGG TCGGCGAAGC CGGGCTCGAC GCCTTCCTGA TCGCCGTTGC GGTCGCCATC
GCGATTGCGA TGATGCTGCC GGCCTATGCC CGCCGCCGCC TGTTCCAGAC CGGCAAGCCG
ATGAAGGTGT GGCCGTTCGC GCTCAGCCTG CTGATCGGAT TGCCGCTGTT GGCGACGCTG
ATCTTCGGCA AGCCGTTCAG CTTCGAGATT CCGGCGCTGA AGGGCTTCAA CTTTGCCGGC
GGCTCCCGCG TGGCGCCGGA ATTCGTCGCG CTGACGCTGG CGCTGTCGAC CTATACGGCG
GCGTTCATCG CCGAGATCGT GCGCGCCGGC ATTCAGTCGG TGCACAAGGG ACAGATGGAA
GCCGGCGCCT CGCTCGGGCT GTCGCGCGGC TCGACGCTGC GCCTGGTGGT GGTGCCGCAG
GCGCTGCGGG TGATCCTGCC GCCGCTGACC AACCAGTATC TCAACCTGAC CAAGAACTCG
TCGCTGGCGG TGGCGATCGG CTATCCGGAT CTGTTCTCGG TGTTCGCCGG CACCACGCTG
AGCCAGACCG GGCAGGCCAT CGAAATCATC GCCATCACCA TGAGCGTGTA TTTGTTGATC
TCGATCGTCA CCAGCGCATT GATGAGTTTC TACGGTTGGC GGCTCGGGCG GAGTCTCGGC
TCATGA
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| Protein sequence | MAIEARPPPT QFVARLRRLL GGRAGWGGLL LQVLFVAALV WVAYEIVDNA RGNLANQRIA
SGFGFMSQTA GFGVSQALIP YSEADSYTRV FLVGLVNTLV VSIIGIIFAT IIGFMVALGR
LSPNWLLSKI SGGYVELVRN LPLLFQILFW YLAVLGTLPS PRQSVSVFDA FFLSNRGIVV
PKPVGEAGLD AFLIAVAVAI AIAMMLPAYA RRRLFQTGKP MKVWPFALSL LIGLPLLATL
IFGKPFSFEI PALKGFNFAG GSRVAPEFVA LTLALSTYTA AFIAEIVRAG IQSVHKGQME
AGASLGLSRG STLRLVVVPQ ALRVILPPLT NQYLNLTKNS SLAVAIGYPD LFSVFAGTTL
SQTGQAIEII AITMSVYLLI SIVTSALMSF YGWRLGRSLG S
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