| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2549 |
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| Symbol | |
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| ID | 3970978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2763337 |
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| End bp | 2764389 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925657 |
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| Product | lysine-arginine-ornithine-binding periplasmic protein |
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| Protein accession | YP_532418 |
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| Protein GI | 90424048 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.216585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.482695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAG GACGACGTTC CTTGAAAGGC TTGGCTATGA AACGCGTATC TCTCGCTCTC
TCTGTTGCCG TCGCCGCCGG GTTTCTGACC CAGGCGGCCG GCGCGCAAAC CCTGAAGACG
GTCCAGGACC GGGGCGTTTT GTCCTGCGGC GTCAGCCAGG GCCTGCCGGG GTTCTCCGCC
CCCGACGACA AGGGCAACTG GACCGGCATC GACGTCGACG TCTGCCGCGC CATCGCCGCC
GCGGTGTTCA ACGATCCGAC CAAGGTGAAG TTCGTGCCGC TGTCGGCCAA GGATCGCTTC
ACCGCGCTGC AGTCCGGCGA GATCGACGTG TTGTCGCGCA ACACCACCTG GACGGTGTCG
CGCGATACCT CGCTCGGCGT CAATTTCACC GGCGTCACCT ATTATGACGG CCAGGGCTTC
CTGGTCCGCA AGGCGCTGAA GGTGAATTCC GCGCTCGAAC TCAACTCGGC GTCGATCTGC
GTGCAGACCG GCACCACCAA CGAGCAGAAC GTTGCCGACT ATTTCAAGGG CAACAACATG
AAGTACGAGG TGATCGCCTT CGGCACCGCC GACGAAGCCG TCAAGGCCTA TGAATCCGGC
CGTTGCGACG TGTTCACCTC CGACGTTTCG CAGCTTTATG CGCTGCGGCT GAAGCTCGCC
ACCCCGGCCG ACCACGCCGT GCTGCCGGAA GTGATCTCCA AGGAGCCGCT CGGCCCGTTG
GTGCGCCACG GCGACGACCA GTGGTTCGAC ATCGTGAAAT GGACGCTGTT CGCGCTGCTC
AACGCCGAAG AACTCGGCGT CAACCAGAAG AACGTCGACG ACCAGGCCAA GCTCGACAAG
CCGGAGCTGA AGCGGGTGTT CGGCACCGAC GGCAACCTCG GCGAACAGCT CGGCCTGACC
AAGGATTGGG TGATCCGCAT CGTCAAGGCG ACCGGCAATT ACGGCGAAAT CTTCGATCGC
AACGTCGGCG CCGGCTCCAA GCTCGGCATC GCCCGCGGCC TCAACCAGTT GTGGAACAAG
GGCGGCATCC AGTACGCGCC GCCGATCCGC TAA
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| Protein sequence | MRPGRRSLKG LAMKRVSLAL SVAVAAGFLT QAAGAQTLKT VQDRGVLSCG VSQGLPGFSA
PDDKGNWTGI DVDVCRAIAA AVFNDPTKVK FVPLSAKDRF TALQSGEIDV LSRNTTWTVS
RDTSLGVNFT GVTYYDGQGF LVRKALKVNS ALELNSASIC VQTGTTNEQN VADYFKGNNM
KYEVIAFGTA DEAVKAYESG RCDVFTSDVS QLYALRLKLA TPADHAVLPE VISKEPLGPL
VRHGDDQWFD IVKWTLFALL NAEELGVNQK NVDDQAKLDK PELKRVFGTD GNLGEQLGLT
KDWVIRIVKA TGNYGEIFDR NVGAGSKLGI ARGLNQLWNK GGIQYAPPIR
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