| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2548 |
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| Symbol | |
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| ID | 3970977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2761832 |
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| End bp | 2763025 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925656 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_532417 |
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| Protein GI | 90424047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0555491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.497435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCT CCGATAACGG CGATCTGCCG CTTCGCACCG ACACCCATCT GGTCACCGCC
GGCCGTGACA CTGCAGCGCA AAAAGGATTC GTCAATCCGC CCGTGGTGCG CGGCTCCACC
GTGCTGTATC CGACCGCGGC CGATCTGCAC GCCCATCGCG GCGAGTTCTC CTATGGCCGC
CACGGCACCC CGACCACCAA AGCCCTGCAA CAGGCATTGG CGGCGCTGGA AGGTCCGAAT
TGCGCCGGCG TGGCGCTGGC GCCGTCCGGG GTGGCGGCGA TTTCCACCGC CCTGCTCGGC
GTGCTGAAGG CTGGCGATCA TCTGTTGGTG TGTGACAACG CCTACCGTCC GACCCGGCTG
TTCTGCGACG GGCTGTTGCA GCGCTACGGC GTCACCACCG GCTATTTCGA TCCATCGATC
GGCTCAGGCA TCGAAGCGCT GTTCAGGCCG AACACCGCCG CCGTCATGGT CGAGGCGCCC
GGCTCGCAAT CCTTCGAAAT GCCGGACATT CCGGCGATCG CCGCGGTGGC GCACGCCCAT
GGCGCGCTGG TGCTCGACGA CAATACCTGG GCGACGCCGC TGTTTCACCG TTCGCTCGAC
CACGGCGTCG ACATCTCGAT CCAGGCCGCG ACCAAATATA TCGGCGGCCA TTCCGACATC
ATGTTCGGCA CCATCTCGGC CAACGCCAAA GCGTGGCCGC GGGTCGAGGA CGCGGTCCGC
GCGCTCGGCG TCTGCGCCGG CCCCGACGAC GTGTTCCTGG CGCTGCGCGG CTTGCGCACG
CTGGCGGTGC GGCTCAAGCA TCACCAAGCC GCCGGGCTGG AGATCGCGCG CTGGCTGCAA
CAGCGCCCCG AGGTCGCAAG GGTGCTGCAT CCGGCATTGG AAACCGATCC CGGCCACGCG
ATCTGGAAGC GGGACTTCAC CGGCGCCTCC GGGCTGTTCA GCATCGTGCT GAAGCCGGCC
TCACAAAAGG CGGTCGACGC GCTGCTCGAC ACCGTGAAAC TGTTCGGCAT GGGCTATTCC
TGGGGCGGCT TCGAGAGCCT GGTGATTCCG TTCGATTGCG CCAGCTACCG CAGCGCGACC
ACATGGGCGC CGGGCGGACC GGCGTTGCGG CTGCATATCG GGCTGGAGAG CGTCGAGGAT
CTCAAGGCCG ATCTGGAGCG CGGCTTCGCG GCGTTCAACG CCGCGACAAG CTGA
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| Protein sequence | MNSSDNGDLP LRTDTHLVTA GRDTAAQKGF VNPPVVRGST VLYPTAADLH AHRGEFSYGR
HGTPTTKALQ QALAALEGPN CAGVALAPSG VAAISTALLG VLKAGDHLLV CDNAYRPTRL
FCDGLLQRYG VTTGYFDPSI GSGIEALFRP NTAAVMVEAP GSQSFEMPDI PAIAAVAHAH
GALVLDDNTW ATPLFHRSLD HGVDISIQAA TKYIGGHSDI MFGTISANAK AWPRVEDAVR
ALGVCAGPDD VFLALRGLRT LAVRLKHHQA AGLEIARWLQ QRPEVARVLH PALETDPGHA
IWKRDFTGAS GLFSIVLKPA SQKAVDALLD TVKLFGMGYS WGGFESLVIP FDCASYRSAT
TWAPGGPALR LHIGLESVED LKADLERGFA AFNAATS
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