| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2543 |
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| Symbol | |
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| ID | 3970972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2755936 |
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| End bp | 2758026 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637925651 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_532412 |
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| Protein GI | 90424042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.845119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.304866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA CCCCGAGCAG GTGGCGGCAG ATCAGAACCG CGGCGATTGT CGTCGCGGTG
CTCGGCGTCA TCGCCGCCGG CGCAATGTCG GCGTGGGTCT GGTCGCTCGG GCCGCTGCCG
CTCGAGGCTG CGCGGCAGGT CTCGACTTCG GTGGTCGACC GCAACGGCAA ATTGCTACGC
GCCTATGCGA TGGCGGACGG CCGCTGGCGG CTGCCGGTGC ATGGGGCGAC CGACGTCGAC
CGGCGCTATC TCGATCTGTT GCTGGCCTAT GAGGACAAGC GGTTTTACAG CCATCACGGC
GTCGATCCGC TGGCGCTCGG CCGCGCTGCT TGGCAGCTGC TCACGCACGG CCGCATCGTC
TCCGGCGGCT CCACCATAAC CATGCAACTG GCGCGGCTGC TCGAGCCGCG CCGCGAGCGC
TCGGTCCACG CCAAGCTGCG CCAGATGGTG CGCGCTCTGC AACTGGAGCG GCAGCTCAGC
AAGAACCAGA TCCTCGATCT CTATCTGACG CTGGCGCCCT ACGGCGGCAA CCTCGAAGGA
ATCCGCGCGG CGTCGATCGG TTATCTCGGC AAGGAGCCGA AGCGGCTGTC GCTCGCCGAA
TCCGCGCTGT TGGTGGCGCT GCCGCAATCC CCCGAAACCC GCCGGCTGGA CCGCCATCCG
GCGGCGGCGC GGGCCGCCCG CGACCGCGTG CTCGACCGCA TGGTAGAGGA CGGCGTGCTC
AGCGGCGACG ACGCGGCGCA GGCCAAGGCG GTGGCGTTGG CGCGGCAGCG CACGCCGATG
CCGATGCTGG CGCCGCATTC CGCCGATCAG GCGATGGCGG CCGGGAAAGG CGCGGCGACG
ATCCGGCTGA CGCTGGACGC TGCCATCCAG CGCGCGCTGG AAGCGCTGGC GCGCGACCGC
GCCGCAGCGC TCGGACCCGA TATCTCGATC GCGCTGCTCG CGGTCGACAA TGCCAGCGGC
GAGATTCTCG CTCGGGTCGG TTCGCCGGAC TACTTCGACA ACCGCCGCGC CGGCCAGGTC
GACATGAGCC GCGCGGTGCG CTCGCCGGGT TCGACCCTGA AGCCGTTCAT CTACGGGCTC
GCCTTCGAGG ACGGCTTCGT GCATCCGGAG AGCCTGATCG ACGACCGCCC GATCCGGTTC
GGCGCCTACG CGCCGGAGAA TTTCGACATG ACCTTCCAAG GCACGGTGCC GGTGCGCAAG
GCGCTGCAAT TGTCGCTCAA CGTGCCGGCG ATCGCGTTGC TGGACCGCGT CGGATCGAGT
CGCCTCGCGG CGCGGCTGAA ACAGGCCGGC GCGGCCTTGG TGCTGCCGAA GGACGAGGCG
CCGGGGCTGG CGATGGGGCT CGGCGGCGTC GGCATCCGGC TGCAGGATCT GGTGCAGCTC
TATTCGGGCA TCGCCCGGCT CGGCGCCACG GTGCCGCTGC GCGAGATCGC GCTGGGGGAG
GCGACGCCGG CGGAGCCGCT GCGGCTGCTC GATCCGGTGG CAGCCTGGCA GGTCGGCAGC
GTGCTGCTCG GCACCCCGCC GCCCGACAAC GCCGCGGCCA ATCGGATCGC CTTCAAGACC
GGCACCTCCT ACGGCTATCG CGACGCCTGG TCGGTCGGTT TCGACGGCCG CATCACCATC
GGGGTCTGGG TCGGCCGGCC GGACGGTGCC GCGGTGCCCG GCCTGGTCGG CCGCACCGCC
GCAGCGCCGA TCCTGTTCGA CGCCTTCGCC CGCACCGGCC GGCTGCCGGC GGCGCTGGCG
AAAGCCCCGC GCGGCACGCT GATGGCGAGC AACGCCAAAT TGCCGTTGCC GCTGCGGCGC
TTCCGTCCGG TCGGCGAATT GCTGCGCAAT GGCGCAGAGC AGCCGCTGCG GATCCAGTTT
CCGCTGAACG GCTCGCGGAT CGACGGCTCC GGCGACATCT CGACGCCGTC GCTGCCGGTC
AAGGTGGCGG GCGGGGTACT GCCGCTGACC ATGCTGGTGA ACGGTGTGGC GGTAGGGCAG
ATCGACGGCC GCCGGCAACG GCTGCTCGAC CAGCCCGGGC CGGGCTTCGT CCGGCTCACC
GTGATGGACG CCATGGGCGC CGCGGACACA GTCGTCGTCC GAATTCAGTA G
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| Protein sequence | MSETPSRWRQ IRTAAIVVAV LGVIAAGAMS AWVWSLGPLP LEAARQVSTS VVDRNGKLLR
AYAMADGRWR LPVHGATDVD RRYLDLLLAY EDKRFYSHHG VDPLALGRAA WQLLTHGRIV
SGGSTITMQL ARLLEPRRER SVHAKLRQMV RALQLERQLS KNQILDLYLT LAPYGGNLEG
IRAASIGYLG KEPKRLSLAE SALLVALPQS PETRRLDRHP AAARAARDRV LDRMVEDGVL
SGDDAAQAKA VALARQRTPM PMLAPHSADQ AMAAGKGAAT IRLTLDAAIQ RALEALARDR
AAALGPDISI ALLAVDNASG EILARVGSPD YFDNRRAGQV DMSRAVRSPG STLKPFIYGL
AFEDGFVHPE SLIDDRPIRF GAYAPENFDM TFQGTVPVRK ALQLSLNVPA IALLDRVGSS
RLAARLKQAG AALVLPKDEA PGLAMGLGGV GIRLQDLVQL YSGIARLGAT VPLREIALGE
ATPAEPLRLL DPVAAWQVGS VLLGTPPPDN AAANRIAFKT GTSYGYRDAW SVGFDGRITI
GVWVGRPDGA AVPGLVGRTA AAPILFDAFA RTGRLPAALA KAPRGTLMAS NAKLPLPLRR
FRPVGELLRN GAEQPLRIQF PLNGSRIDGS GDISTPSLPV KVAGGVLPLT MLVNGVAVGQ
IDGRRQRLLD QPGPGFVRLT VMDAMGAADT VVVRIQ
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