Gene RPC_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2539 
Symbol 
ID3970967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2747785 
End bp2748270 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content48% 
IMG OID637925646 
Producthypothetical protein 
Protein accessionYP_532408 
Protein GI90424038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.40307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.374893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAG ATGGAAATGA GGACTTGATC GCCGAGGAGC TTGGCATCGA CCCCGACGAA 
CTGGCCCAAC TGAAATACGT TGAGGGGGAA AGCGCCTCTG AGGACGGCAT AATTTACTAC
TATTACATCA CCTTTTCCGA AGGAAATCCG CCGGCCATCA TGGCGAAGAT TAAGGGGCTC
GTCGGTCTTA CCGTACAGCT GAGTCCGAAT CTCTTCGAGG AGCCTGACGG CGATCAAGAT
CTTGATGAAG ATCGAAACGT GATCTCCCCT CTGTTTGAGG TTGGAAAACG GTATGAATTT
AGAATGATCA TTGATGGGGA GGAAACTAGG TTTTGGCGGA CCATCGCTCA ATATCAGCAC
CCTATGGTGA AGTTCGCTGA CGTCGAATCA AAGGCAGTAA ACGAGCTTCT CAAAGCAAAG
ACCTTGCACG GCGAAATTAT CAACGTGACA TCACCGAACT TCATTAGCGC AACAATTCAA
GACTAG
 
Protein sequence
MIVDGNEDLI AEELGIDPDE LAQLKYVEGE SASEDGIIYY YYITFSEGNP PAIMAKIKGL 
VGLTVQLSPN LFEEPDGDQD LDEDRNVISP LFEVGKRYEF RMIIDGEETR FWRTIAQYQH
PMVKFADVES KAVNELLKAK TLHGEIINVT SPNFISATIQ D