| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2527 |
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| Symbol | |
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| ID | 3970993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2739623 |
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| End bp | 2740981 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925635 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_532397 |
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| Protein GI | 90424027 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0977004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC TCGGGATCGG CATCAGCTAC GGCGTGGCGA CGCTGCTGGC GATGTTCTCC
GGGATGCCGA TCGCGTTCGC GCTCGGCGCC GTCGCGGTTC TGTTCATGGC GATCTACATG
CCGGCGGCCT CGCTCGATAC CGTGACGCAG AACGTCTATG AGGAGATGGC CTCGATCACG
CTGTTGTCGA TTCCTCTCTT CATTTTGAAG GGCGCGGCGA TCGGCAAATC CCGCGCCGGG
CAGGACCTGT ATTCGGCGCT GCACGCCTGG CTCAATCGGG TGCCGGGTGG GCTCGGCGTC
GCCAACGTAT TCGCCTGCGC GCTGTTCGCC GCGATGGCCG GCTCCTCGCC CGCGACCTGC
TCGGCGATCG GCTCGGCCGG CATTCCGGAG ATGCGCAAGC GCGGCTATTC CGGCGGGTTC
GCCGCCGGCA TCATCGCCGC CGGCGGCACG CTCGGGATTC TGCTGCCGCC ATCGATCACC
ATGATCCTGT TCGCAGTCGC CGCGGAAAAA TCGCTCGGCC GGCTGTTCCT GGCCGGGATC
GGCCCGGGCC TGTTGCTTGT GCTGCTGTTC GGCAGCTACG CGGTGTTCCG CTTCCGCAAG
GAATACGCCG CGGCGAGCCG GCTTTACGAA CAGACCGGCG TCGATGCGCC GATCTTGGCG
CGCGACAAAT TCACCATGGC GCAACGCTTC AACGCGCTGC CGCGGGTGGC GCCGTTCGTG
ATCCTGCTCA CTGGGGTGAT GATCGCGCTG TATGGCGGCT ACGCCACGCC GTCGGAAACC
GCCGGCCTCG GCGGCTTGCT GGCGCTGGCG CTGATCGCGC TGATCTACGG GGTGTGGCGG
CCGACTGATC TGGCGCCGAT TCTGCAGGCG ACGATTCGCG AATCCACCAT GCTGATGATG
ATCATCGGGA TGTCGCTGTT GTACTCCTAC GTGATGAGCT ATCTGCACAT CTCGCAGTCG
GTCGCCGAAT CCATCGTGGC GATGCAGCTG CCGCGCTGGG AATTGCTTGC GGCTATTCTC
GTGATGGTCG TGGTGCTGGG CTTCTTTCTG CCGCCGGTGT CGATCATCCT GATGACCGCG
CCGATCATCC TGCCGCCGCT GCGCGCCGCC AATTTCGACA TCATCTGGTT CGGCATCGTC
ATGACCATCG TGATGGAGAT GGGGCTGATC CATCCCCCCG TCGGGCTGAA CATCTTCGTG
ATCCGCAATG TCGCGCCCGA CATCCCGCTC TCGGAGGTGA TCTGGGGCAC GCTGCCGTTC
GTGCTGCTGA TGATGTTCGC CGTGCTGCTG CTGTGCTTCG TGCCGCAAAT CGCCACCGGC
TTCCCCGATC TGGTGATGGG ACCGGAAAGC GTGCGGTGA
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| Protein sequence | MSVLGIGISY GVATLLAMFS GMPIAFALGA VAVLFMAIYM PAASLDTVTQ NVYEEMASIT
LLSIPLFILK GAAIGKSRAG QDLYSALHAW LNRVPGGLGV ANVFACALFA AMAGSSPATC
SAIGSAGIPE MRKRGYSGGF AAGIIAAGGT LGILLPPSIT MILFAVAAEK SLGRLFLAGI
GPGLLLVLLF GSYAVFRFRK EYAAASRLYE QTGVDAPILA RDKFTMAQRF NALPRVAPFV
ILLTGVMIAL YGGYATPSET AGLGGLLALA LIALIYGVWR PTDLAPILQA TIRESTMLMM
IIGMSLLYSY VMSYLHISQS VAESIVAMQL PRWELLAAIL VMVVVLGFFL PPVSIILMTA
PIILPPLRAA NFDIIWFGIV MTIVMEMGLI HPPVGLNIFV IRNVAPDIPL SEVIWGTLPF
VLLMMFAVLL LCFVPQIATG FPDLVMGPES VR
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