| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2526 |
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| Symbol | |
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| ID | 3970992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2737475 |
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| End bp | 2739298 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925634 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_532396 |
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| Protein GI | 90424026 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0540885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GCAACATTGC CATCATCGCC CACGTCGACC ACGGCAAGAC CACGCTGGTG
GACAAGCTCT TGCAGCAGTC CGGCACCTAT CGCGACAACC AGCGCCAGGT CGAGCGCGCG
ATGGATTCCA ACGATCTGGA AAAAGAGCGC GGCATCACCA TTCTGGCCAA GTGCACCTCG
GTGCAGTGGA AGGACGTCCG CATCAACATC GTCGACACCC CGGGCCATGC CGATTTCGGC
GGCGAGGTGG AGCGCATCCT GTCGATGGTC GACGGCGTGA TCGTCTTGGT CGACGCCGCC
GAGGGCCCGA TGCCGCAGAC CAAATTCGTG GTCGGCAAGG CGTTGAAGCT CGGCCTCAAG
CCGATCGTGG CGATCAACAA GGTCGACCGC CCCGACGCCC GCATCACCGA AGTGGTCAAC
GAAGTGTTCG ACCTGTTCGC AGCGCTCGAC GCCACCGACG ACCAATTGGA TTTCCCGATC
CTGTACGGCT CCGGCAAGAA CGGCTGGATG TCCGACAAGC CCGACGGCAG CCAGGACGAG
GGCATGAAGC CGTTGTTCGA ACTGGTGGTG AAGCACGTCC ACGCCCCGGT GGTGGAAGAC
GGCCCGTTCC GGCTGCTCGG TACCATCCTG GAGGCCAACC CCTATCTCGG CCGCATCATC
ACCGGCCGCA TCGCCTCGGG CTCGGTGAAG CCGAACCAGA GCGTCAAGGT GATGTCGCGC
GACGGCAAGC TGGTGGAAAC CGGCCGCATC ACCAAGATCC TGGCGTTCCG CGGCCTCGAG
CGCACCCCGA TCGACGAAGC CGAAGCCGGC GACATCGTCG CCATCGCCGG GCTGCCGAAG
GGCACCGTGG CCGATACCTT CTGCGATCCC AGCGTCGAGA CCCCGATCCA GGCCCAGCCG
ATCGATCCGC CGACGGTGTC GATGTCGTTC ATCGTCAACA ACTCGCCGCT CGCCGGCACC
GAAGGCGACA AGGTGACAAG CCGGCTGATC CGCGACCGCT TGATGCGCGA GGCCGAAGGC
AACGTCGCGC TGAAGGTGGT GGAATCCGCC GACAAGGACG CCATCGAAGT CTCCGGCCGC
GGCGAATTGC AGCTGGCGAT CCTGATCGAA CAGATGCGCC GCGAAGGTTT CGAGCTCTCG
GTGTCGCGTC CGCGCGTGGT GCTCAGCAAG GACGAAGAAG GTACCGTGCT GGAGCCGGTC
GAAGAGGTCG TGATCGACGT CGACGAGGAA TTCTCCGGCG TGGTCGTGCA GAAGATGAGC
GAACGCAAGG CCGAGATGAT CGAGATGCGG CCGTCCGGCG GCCATCGGTT GCGGCTGGTG
TTCTACGCGC CGACCCGCGG CCTGATCGGT TACCAGGGCG AGTTGATGAC CGACACCAAG
GGCACCGCGG TGATGAACCG GCTGTTCCAC AACTACCTGC CGTACAAGGG CGAGATCCAG
GGCCGCCGCA ACGGCGTGCT GATCTCCAAC GACCAGGGCG AGGCGGTGGC CTACGCGATG
TTCAAGTTGG AAGATCGCGG CCCGATGATG ATCGAGCCGG GCTGCAAGGT CTACAAGGGC
ATGATCGTCG GTGAGCACAC CCGCGACAAC GACCTCGAGA TCAACGTGCT GAAGGGCAAG
CAGCTCAACA ACATCCGCAC CACCTCGAAG GACGAAGCGG TGCGCTTGAC CCCGCCGATC
CGGATGACGC TGGAAAAGGC GTTGGCCTAT ATCGAGGAGG ACGAGTTGGT CGAGATCACC
CCGAAGTCGA TCCGGCTGCG CAAGCGTCAC CTCGACGCCA ACGAGCGCAA GCGCGCCGAA
AAGAGCAAGG TGGCGGTGGC GTAA
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| Protein sequence | MKLRNIAIIA HVDHGKTTLV DKLLQQSGTY RDNQRQVERA MDSNDLEKER GITILAKCTS
VQWKDVRINI VDTPGHADFG GEVERILSMV DGVIVLVDAA EGPMPQTKFV VGKALKLGLK
PIVAINKVDR PDARITEVVN EVFDLFAALD ATDDQLDFPI LYGSGKNGWM SDKPDGSQDE
GMKPLFELVV KHVHAPVVED GPFRLLGTIL EANPYLGRII TGRIASGSVK PNQSVKVMSR
DGKLVETGRI TKILAFRGLE RTPIDEAEAG DIVAIAGLPK GTVADTFCDP SVETPIQAQP
IDPPTVSMSF IVNNSPLAGT EGDKVTSRLI RDRLMREAEG NVALKVVESA DKDAIEVSGR
GELQLAILIE QMRREGFELS VSRPRVVLSK DEEGTVLEPV EEVVIDVDEE FSGVVVQKMS
ERKAEMIEMR PSGGHRLRLV FYAPTRGLIG YQGELMTDTK GTAVMNRLFH NYLPYKGEIQ
GRRNGVLISN DQGEAVAYAM FKLEDRGPMM IEPGCKVYKG MIVGEHTRDN DLEINVLKGK
QLNNIRTTSK DEAVRLTPPI RMTLEKALAY IEEDELVEIT PKSIRLRKRH LDANERKRAE
KSKVAVA
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