Gene RPC_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2512 
Symbol 
ID3971094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2724651 
End bp2725421 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID637925620 
Productputative transcriptional regulator 
Protein accessionYP_532382 
Protein GI90424012 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.915644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.474436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTC TGGCGGAAAT GCGTGTGATC GAAGCCGACG ACGTCGCCGA GGATGGCGCT 
GCCGAGGTCT TCGGACCGAC CCGCGAAGAG GTCTCTGAAC ATCCGCAGGC GCGGCCGGAA
GAACTGCGGC TGTTGGAAGC GCTGCTGTTC GCCTCCGCCG AGCCGCTAGA TACGGCCGCG
CTCGCCAAGC GGATGCCGGA GGGCGTCGAC GTCAAGGCGG CGCTGCTGCA GCTGCAGGCC
GATTACGCGC ATCGCGGCGT CAATCTGGTG CGGGTCGCCA ACAAATGGAC ATTCCGCACC
GCCGGCGATC TGGCCTGGCT GATGACCCGC GAGAGCACGG AAACGCGACG GCTGTCGCGC
GCGGCGATCG AGATGCTGGC GATCATCGCT TATCATCAGC CGGTGACCCG TGCCGAGATC
GAAGACATTC GCGGCGTGGT CACCTCCAAG GGCACGCTGG ATGTGCTGCT GGAGACCGGT
TGGGTCAAGC CGCGCGGCCG TCGCAAGACC CCGGGCCGGC CGCTGACTTT CGGCACCACC
GAGGCGTTCC TGTCGCAGTT CAGCCTGGAA TCGCTCGGCG ATCTGCCCGG CCTCGAGGAA
CTGAAGGGCA CCGGGCTGCT CGACTCGCGG CTGCCGGTGG GCTTCAGCGT GCCGATGCCG
TCGGATGACC CGGCGTTGCG CGACGACGAA GACCCGCTGG AGATCGGCGA TCTGGAACTG
GCGCTGGCGC CGGTGGCGGA CGCCGAGGAC GGCAACGGCA GCGCCGATTG A
 
Protein sequence
MASLAEMRVI EADDVAEDGA AEVFGPTREE VSEHPQARPE ELRLLEALLF ASAEPLDTAA 
LAKRMPEGVD VKAALLQLQA DYAHRGVNLV RVANKWTFRT AGDLAWLMTR ESTETRRLSR
AAIEMLAIIA YHQPVTRAEI EDIRGVVTSK GTLDVLLETG WVKPRGRRKT PGRPLTFGTT
EAFLSQFSLE SLGDLPGLEE LKGTGLLDSR LPVGFSVPMP SDDPALRDDE DPLEIGDLEL
ALAPVADAED GNGSAD