Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2512 |
Symbol | |
ID | 3971094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2724651 |
End bp | 2725421 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925620 |
Product | putative transcriptional regulator |
Protein accession | YP_532382 |
Protein GI | 90424012 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.915644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.474436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTC TGGCGGAAAT GCGTGTGATC GAAGCCGACG ACGTCGCCGA GGATGGCGCT GCCGAGGTCT TCGGACCGAC CCGCGAAGAG GTCTCTGAAC ATCCGCAGGC GCGGCCGGAA GAACTGCGGC TGTTGGAAGC GCTGCTGTTC GCCTCCGCCG AGCCGCTAGA TACGGCCGCG CTCGCCAAGC GGATGCCGGA GGGCGTCGAC GTCAAGGCGG CGCTGCTGCA GCTGCAGGCC GATTACGCGC ATCGCGGCGT CAATCTGGTG CGGGTCGCCA ACAAATGGAC ATTCCGCACC GCCGGCGATC TGGCCTGGCT GATGACCCGC GAGAGCACGG AAACGCGACG GCTGTCGCGC GCGGCGATCG AGATGCTGGC GATCATCGCT TATCATCAGC CGGTGACCCG TGCCGAGATC GAAGACATTC GCGGCGTGGT CACCTCCAAG GGCACGCTGG ATGTGCTGCT GGAGACCGGT TGGGTCAAGC CGCGCGGCCG TCGCAAGACC CCGGGCCGGC CGCTGACTTT CGGCACCACC GAGGCGTTCC TGTCGCAGTT CAGCCTGGAA TCGCTCGGCG ATCTGCCCGG CCTCGAGGAA CTGAAGGGCA CCGGGCTGCT CGACTCGCGG CTGCCGGTGG GCTTCAGCGT GCCGATGCCG TCGGATGACC CGGCGTTGCG CGACGACGAA GACCCGCTGG AGATCGGCGA TCTGGAACTG GCGCTGGCGC CGGTGGCGGA CGCCGAGGAC GGCAACGGCA GCGCCGATTG A
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Protein sequence | MASLAEMRVI EADDVAEDGA AEVFGPTREE VSEHPQARPE ELRLLEALLF ASAEPLDTAA LAKRMPEGVD VKAALLQLQA DYAHRGVNLV RVANKWTFRT AGDLAWLMTR ESTETRRLSR AAIEMLAIIA YHQPVTRAEI EDIRGVVTSK GTLDVLLETG WVKPRGRRKT PGRPLTFGTT EAFLSQFSLE SLGDLPGLEE LKGTGLLDSR LPVGFSVPMP SDDPALRDDE DPLEIGDLEL ALAPVADAED GNGSAD
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