| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2511 |
|---|
| Symbol | |
|---|
| ID | 3971093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2723794 |
|---|
| End bp | 2724630 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637925619 |
|---|
| Product | chromosome segregation and condensation protein ScpA |
|---|
| Protein accession | YP_532381 |
|---|
| Protein GI | 90424011 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.328844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG AGATCTTGTC GTTCGAAACC GGCCGTCCTG CCGCCGAACT GGTGCCTGCC
GACGACGAAC CGGCGCTGCT GGTCGATGTC GAGGGCTATG AAGGCCCGCT CGACCTGCTG
CTGGCGTTGG CGCGGCAGCA GAAGGTCGAC CTGCACAAGA TTTCGATCCT GGCCTTGGCC
GACCAGTATC TGGTGTTCAT CGAGGCCGCC CGCAAAATCC GGCTCGAGCT CGCCGCCGAC
TATCTGGTGA TGGCGGCGTG GCTGGCGTTT CTGAAATCGC GGCTGCTGTT GCCGGAACCG
CCGACGCCCG ATGGCCCGAG CGCCGAGGAC ATGGCGACCG CGCTGGCCAA CCGGCTGCGC
CGGCTGGAGG CGATCCGCGA GGCCTCGAAC CGGCTGATGA CCAGGCCGCA GCTGCAGCGC
GACATCTTTC CGCGCGGACT GCCGGAGGGC ATCGCCGAGA TCAAGCATCC GCGCTTCACC
GCGACGCTGT ACGACCTGTT GTCGGCCTAT GCGGCGCAGC GCCAGCAGAG CGTCATCGCC
AAGGTGCATC TGGCGCGCCG CACGGTTTGG TCCTTGGCGG AGGCGCGGGC GTCGCTGGAG
CGGCTGGTCG GCATCGCCGA CGAGTGGGCC AAGCTCGACG ACTACCTGAT CGAATACGTC
ATCGATCCCT CGCAAAAGGC CACCGTGTTC GCCTCCAGCT TCGCCGCGGC GCTGGAACTG
GTGCGCGAAG GCAAACTCGA ACTGCATCAG TCGGAGGCGT TCGCGCCGTT GTATTTTCGT
AAGCGGGCGC CGCATCCGGT GGATGCGGCG GCCGCGCCGG ACGTTCCGGC CGAGTAG
|
|---|
| Protein sequence | MSAEILSFET GRPAAELVPA DDEPALLVDV EGYEGPLDLL LALARQQKVD LHKISILALA
DQYLVFIEAA RKIRLELAAD YLVMAAWLAF LKSRLLLPEP PTPDGPSAED MATALANRLR
RLEAIREASN RLMTRPQLQR DIFPRGLPEG IAEIKHPRFT ATLYDLLSAY AAQRQQSVIA
KVHLARRTVW SLAEARASLE RLVGIADEWA KLDDYLIEYV IDPSQKATVF ASSFAAALEL
VREGKLELHQ SEAFAPLYFR KRAPHPVDAA AAPDVPAE
|
|---|
| |