Gene RPC_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2501 
Symbol 
ID3971083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2713880 
End bp2714908 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID637925609 
Producthypothetical protein 
Protein accessionYP_532371 
Protein GI90424001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.257931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTG TCACTGACGG GACGCTGCGG CCGAGCAAAG CGCCAACGCT GCCCTGGCTC 
TGGGTTGGAA TTGCTACCGC GCTGGTGCTG GCGATCGGAT TCGGCGCCAT GATCGCCATC
ACCTTTTCGA TGCAGACCGA AATGATCGCG CGCGATCGCG ACAACCAGAT GGCCGCGGTC
AGCGAGGCGA TCACCGCAGC ACTCGACCAG GCCGGCAAGT TCGCTCTGAC CCAGGCCGAG
ACCACGGCCC GGCGGGCCTC GGTCGGGCGC GCGCTGGCGG CCGGCAACCG CGCCGAATTG
CTGGCATTGA CCGCCGGCAC CTACGGCTAT CTCAAGACCC AAAGCGTGCC GGTGTTCGGC
TTCCACAGCG CCGACATGAA GTATCTGCTG CGGCTGCATC TGCCGGAGAA TTTCGGCGAC
GACCTGACGC GGATCCGGCC GATGGTGCTG GCCGCGAACA AGAGCCGCCG CTCCCAGGTC
GGGCTGGAGA TCGGCATCGC CGGCACTTTC GTGCGCGGCA TCGCGATCGT CGAGAACGGC
GCCGACTTCG TCGGCACCGT CGAGGCCGGC CTCAATCTCC AGCCGATCCT CGAACAGGTC
AAATCGATCA GCAACGCCGA CATCGCCATC GTGCTCAGCC AATCTTTCGC CGGGCTGCCG
GCGCGCGGCC CCAACGACAA GGGCGTCGGC GAAGTCTTCG GCGATCTGAA CCTGTTCGCG
TCGACCGATT CGCCGCTGTT CGCCGCGTTG TTGCGCGACG GCGCGATCCG GCTGGTGCGC
AGCCGCGAAG TCGCCGAGCG ACAGATTCAA GGCCAGAGCG GCGCGGTGCT GGTGCAACCC
TTGATCGACT TCAGCGGCCG GATGATCGGC AACGTCGTCG CGGCGAAAAG CTTCGCCTAT
CACGGCGCCG AGCTGCGCCG GACCCAAACC GAACTAATCG CGGCCGCCTT GATCGGCGCC
ATCTTGGCCT TCGTGGTGTT TTCCATCCTC GCGCGGATGA TCGCGATCCG CGCCGGTTGG
CGCCCATGA
 
Protein sequence
MDFVTDGTLR PSKAPTLPWL WVGIATALVL AIGFGAMIAI TFSMQTEMIA RDRDNQMAAV 
SEAITAALDQ AGKFALTQAE TTARRASVGR ALAAGNRAEL LALTAGTYGY LKTQSVPVFG
FHSADMKYLL RLHLPENFGD DLTRIRPMVL AANKSRRSQV GLEIGIAGTF VRGIAIVENG
ADFVGTVEAG LNLQPILEQV KSISNADIAI VLSQSFAGLP ARGPNDKGVG EVFGDLNLFA
STDSPLFAAL LRDGAIRLVR SREVAERQIQ GQSGAVLVQP LIDFSGRMIG NVVAAKSFAY
HGAELRRTQT ELIAAALIGA ILAFVVFSIL ARMIAIRAGW RP