| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2493 |
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| Symbol | |
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| ID | 3971250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2702654 |
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| End bp | 2704072 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925601 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_532363 |
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| Protein GI | 90423993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.43654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.597636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CCTCCTTCGA CGTCATCATC ATCGGCTCCG GCCCCGGCGG CTATGTGGCG
GCGATCCGCG CCGCGCAGCT CGGCCTCAAG ACCGCGATCG TGGAGAAATC CTATCTCGGC
GGCATCTGCC TGAACTGGGG CTGCATCCCG ACTAAGGCGC TCTTACGCTC GGCGGAAATC
TATCACTACA TGCAGCACGC CAAGGACTTT GGGCTGTCGG CGGACAATAT CAGCTACGAT
CCGAAGGCCG TGGTGCAGCG CTCGCGCGGC GTCTCCAAGC GGCTCGCCGA CGGCGTCGGC
TTCCTGATGA AGAAGAACAA GATTTCGATC ATCTGGGGTG CCGCGACCAT CGACGCGCCC
GGCAAGATCA CCGTGAAGGC CGCGAAGTCT GAGCCGCCGA AGGGCGCGCT GGGCGAGGGC
GCCTATCAGG CCAAGCACAT CATCATCGCC ACCGGCGCGC GGCCGCGTGT GCTGCCCGGG
CTCGAGCCCG ACAAGAAGCT GGTCTGGACC TATTTCGAGG CGATGGTGCC GGACGCCATT
CCGAAATCGC TGCTGGTGGT CGGCTCCGGC GCGATCGGCA TCGAATTCGC GTCATTCTTC
CACACCATGG GCAGCAAAGT CACCGTGGTC GAGGTGCTGC CGCAGGTGCT TCCGGTCGAG
GACGCCGAGA TCGCAGGTCT CGCCCGCAAA CGCTTCGAGA AGCAGGGCAT CAAGATCTTG
ACCGGCACCA AGGTCAGCAA GTTGGAGAAG AAGGCCGACA GCGTCATCGC CACCATCGAC
GACGGCAAAA CCACCGAGGC GATCGAGTTC GACCGGGTGA TCTCGGCGGT GGGCGTGGTC
GGCAATATCG AAAACCTCGG GCTGGAAAAG CTCGGGGTAA AGACCGAGCG CGGCTGCGTG
GTGATCGACG GCTATGGCAA GACCAACATC CCCGGCATCT ATGCGATCGG CGACGTCGCA
GGTCCGCCGA TGCTGGCGCA CAAGGCCGAG CATGAGGGCG TGATCTGCGT CGAGGCGATC
AAGGGCCTGC ACCCGCATCC GATGGACAAG CTGCTGATTC CCGGCTGCAC CTATTGCAAT
CCGCAGATCG CCTCGGTCGG GCTCACCGAG GCCAAGGCGA AGGAGGGCGG CCGCGAGATC
CGGGTCGGCC GCTTCCCGTT CGCCGGCAAC GGCAAGGCGA TCGCGCTCGG CGAGGACCAG
GGCCTGGTCA AGGTGATCTT CGACAAGACC ACCGGCCAGC TGCTCGGCGC GCATATGATC
GGCGCCGAGG TCACCGAGCT GATCCAGGGC TATGTGGTGG CGATGAATCT CGAAACCACC
GAGGCCGAGT TGATGCACAC CGTCTTCCCG CATCCGACGC TGTCGGAGAT GATGAAGGAA
GCCGTGCTCG ACGCCTACGG CCAGGTGCTG AACGCCTGA
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| Protein sequence | MSDTSFDVII IGSGPGGYVA AIRAAQLGLK TAIVEKSYLG GICLNWGCIP TKALLRSAEI
YHYMQHAKDF GLSADNISYD PKAVVQRSRG VSKRLADGVG FLMKKNKISI IWGAATIDAP
GKITVKAAKS EPPKGALGEG AYQAKHIIIA TGARPRVLPG LEPDKKLVWT YFEAMVPDAI
PKSLLVVGSG AIGIEFASFF HTMGSKVTVV EVLPQVLPVE DAEIAGLARK RFEKQGIKIL
TGTKVSKLEK KADSVIATID DGKTTEAIEF DRVISAVGVV GNIENLGLEK LGVKTERGCV
VIDGYGKTNI PGIYAIGDVA GPPMLAHKAE HEGVICVEAI KGLHPHPMDK LLIPGCTYCN
PQIASVGLTE AKAKEGGREI RVGRFPFAGN GKAIALGEDQ GLVKVIFDKT TGQLLGAHMI
GAEVTELIQG YVVAMNLETT EAELMHTVFP HPTLSEMMKE AVLDAYGQVL NA
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