| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2489 |
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| Symbol | |
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| ID | 3971246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2698370 |
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| End bp | 2699413 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925597 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_532359 |
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| Protein GI | 90423989 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.447776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.410325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAT CGAAGAAGCG CGACACCGCA GCAGGGGACG AGATTCAGCC GCGATCCGGC
AATGGATCGC AGCATCCGGC GGTTCTCGAG TTCAGCAAGG ACCAGGAGCT GCGCGCGCTG
CGCGACATGC TGCTGATCCG CCGCTTCGAG GAGAAGGCCG GCCAGCTCTA CGGCATGGGC
GCGATCGGCG GGTTCTGCCA TCTCTATATC GGCCAGGAAG CCATCGTGGT CGGCATGCAG
ATGACGCTGA AACTGGGCGA CCAGGTCATC ACCGGCTATC GCGACCACGG CCACATGTTG
GCCTGCGGAA TGGATGCCAA AGGCGTGATG GCCGAATTGA CCGGACGCCA GGGCGGCTAT
TCCAAGGGCA AGGGCGGCTC CATGCATATG TTCAGCAAGG AGAAGCATTT CTACGGCGGC
CACGGCATCG TCGGCGCCCA GGTCTCGCTC GGCACTGGCT TGGCGTTCGC CAACCGCTAC
CGCGGCAACG ACAATGTCAG CCTGGCCTAT TTCGGCGACG GCGCCTCCAA TCAGGGCCAG
GTTTACGAGA GCTTCAACAT GGCGCAGCTG TGGAAGCTGC CGGTGGTCTA CGTCATCGAG
AACAACCGCT ATGCGATGGG CACCTCGGTC AAGCGCTCCT CGGCGCAGAC CGATTTCTCC
AAGCGCGGCG TGTCGTTCAA CATTCCCGGT GAGCAGGTCG ACGGCATGGA CGTCCGCGCG
GTGAAGGCCG CCGGCGACAA GGCGGTGGCG CATTGCCGCG CCGGCAACGG CCCCTACATC
CTGGAGATGC AAACCTATCG CTATCGCGGC CACTCGATGT CGGACCCGGC GAAGTATCGC
ACCCGCGAGG AAGTCGACAA GGTGCGCAGC GATCAGGATC CGATCGAGCA GGTACGCCAG
CGTCTGCTCG GGCTCAAGGT CAGCGAGCAG GAATTGAAGG CGATCGATGC CGAGGTCCGC
GAGATCGTCA ACGGCGCGGC GGAGTTCGCC CAGCACGATC CCGAGCCGGA GCCCGCCGAG
CTCTATACCG ACGTCTACCG CTAG
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| Protein sequence | MAASKKRDTA AGDEIQPRSG NGSQHPAVLE FSKDQELRAL RDMLLIRRFE EKAGQLYGMG
AIGGFCHLYI GQEAIVVGMQ MTLKLGDQVI TGYRDHGHML ACGMDAKGVM AELTGRQGGY
SKGKGGSMHM FSKEKHFYGG HGIVGAQVSL GTGLAFANRY RGNDNVSLAY FGDGASNQGQ
VYESFNMAQL WKLPVVYVIE NNRYAMGTSV KRSSAQTDFS KRGVSFNIPG EQVDGMDVRA
VKAAGDKAVA HCRAGNGPYI LEMQTYRYRG HSMSDPAKYR TREEVDKVRS DQDPIEQVRQ
RLLGLKVSEQ ELKAIDAEVR EIVNGAAEFA QHDPEPEPAE LYTDVYR
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