Gene RPC_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2482 
Symbol 
ID3971239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2691155 
End bp2691631 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID637925590 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_532352 
Protein GI90423982 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.245028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.291037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA CGCCCCGCAA ACCGTCACAA TCCCCTGCCC TGCAGCTCGG CCGCGCCGTC 
GATTGGCCGC AGACGCCCGA CGAGGCCAAG CTCGACCGGG TGCCGAATCC GCAAGCCGAC
ACCGATTATC TGGTGCGCTT CACCGCGCCG GAATTCACTT CGCTGTGCCC GGTGACCGGG
CAGCCGGATT TCGCCCATCT GATGATCGAT TACGCGCCGG GAGCCTGGCT GGTCGAATCG
AAGTCACTGA AACTTTATCT GGCGAGCTTC CGCTCGCATG GCGCGTTCCA CGAGGATTGC
ACGGTGGCGA TCGGCAAGCG CATCGCCCAA GAGATCAAGC CGAAATGGCT GCGGATCGGC
GGCTATTGGT ATCCGCGCGG CGGCATCCCG ATCGACGTGT TCTGGCAGAC CGGAAAACTG
CCGAAGGGCG TCTGGGTGCC CGAGCAAGGC GTCGCCACCT ATCGCGGCCG CGGCTGA
 
Protein sequence
MSKTPRKPSQ SPALQLGRAV DWPQTPDEAK LDRVPNPQAD TDYLVRFTAP EFTSLCPVTG 
QPDFAHLMID YAPGAWLVES KSLKLYLASF RSHGAFHEDC TVAIGKRIAQ EIKPKWLRIG
GYWYPRGGIP IDVFWQTGKL PKGVWVPEQG VATYRGRG