| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2477 |
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| Symbol | |
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| ID | 3971234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2685763 |
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| End bp | 2686653 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925585 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_532347 |
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| Protein GI | 90423977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase
[TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.21215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.382232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC AGATATTCAG GTTTGACGAA GCAAAGGACG CCGCTTTGAC CGCTCCCATC
GCCGCCGCGC CGATCGTCAC CGCGGGCTCC GTCCGCTTCG GCAACGCGCT GCCGCTCGCC
GTGATCGCAG GTCCCTGCCA ATTGGAAAGC CGCGCCCACG CGCTGGAAAC CGCCAGCGCG
CTGAAAGAGA TCGCGCAGAA GCTCGGCATC GGCCTCGTCT ACAAAACCTC GTTCGACAAG
GCCAACCGCA CCAGCGCCAC GAGCCAGCGC GGTCTCGGGC TCGAGCAGGC GCTGCCGATC
TTCGCCGAAA TCCGCGAGAG TTTTGGCCTG CCGGTTCTGA CCGACGTGCA TGAGAGCGAG
CAATGCGCGC GGGCCGCGGA AGCGGTGGAT ATCCTGCAGA TCCCGGCGTT CCTGTGCCGG
CAGACCGACC TGTTGCTGGC GGCGGCGGCG ACCGGCAAAG TCGTCAACGT CAAGAAGGGC
CAGTTCCTGG CGCCCTGGGA CATGGCTAAT GTGGTGCAGA AGCTGACCAG CGCCGGCAAT
GCCAATGTGC TGGTGACCGA GCGCGGGGTG TCGTTCGGCT ACAACACGCT GGTCTCCGAT
ATGCGGGCGC TGCCGATATT GGCGCGCACC ACCGGCGCGC CGGTGATTTT TGATGCCACC
CATTCGGTGC AGCAGCCCGG TGGCAAGGGG ACTTCCTCGG GCGGCGAGCG CGAGTTCGTC
CCGGTGCTGG CGCGTGCCGC GGTGGCGGTC GGCGTTGCCG GGGTGTTCAT CGAGACCCAT
CCGGATCCCG ATCACGCGCC GTCCGACGGC CCCAACATGG TGCCGTTGCG CGAGTTCGAA
GCGCTGATGC AGAGACTGAT GCAGTTCGAC GCGCTGGCGA AGGCGCGCTG A
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| Protein sequence | MIRQIFRFDE AKDAALTAPI AAAPIVTAGS VRFGNALPLA VIAGPCQLES RAHALETASA
LKEIAQKLGI GLVYKTSFDK ANRTSATSQR GLGLEQALPI FAEIRESFGL PVLTDVHESE
QCARAAEAVD ILQIPAFLCR QTDLLLAAAA TGKVVNVKKG QFLAPWDMAN VVQKLTSAGN
ANVLVTERGV SFGYNTLVSD MRALPILART TGAPVIFDAT HSVQQPGGKG TSSGGEREFV
PVLARAAVAV GVAGVFIETH PDPDHAPSDG PNMVPLREFE ALMQRLMQFD ALAKAR
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