Gene RPC_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2459 
Symbol 
ID3971350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2665284 
End bp2666135 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID637925567 
ProductOmpA/MotB 
Protein accessionYP_532329 
Protein GI90423959 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.141596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.174872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAG GGCGGCAGGG CGGCAACAAG AAAAAGCCCG AAGAGGCCGG CGGCCACGTC 
GGCGCTTGGT TCGTCACCTT CGCCGATCTG ATGGGGTTGT TGACCGGCTT CTTCGTGATG
CTGGTGTCAT TTTCGCATCA GGATCAGTAC AAGCTGCAGA TCGTCGCCGG TTCGATGCGC
GAAGCCTTCG GCGTGCAGAT GGACGCCCGT TACTCCGGCG TGATCGAAAA AGACGGTCTG
CCGACTCGCG GCAAGGTCAA GAACGTCGAG CATATCGCCC CCGACCAGGC CACCAACAGG
CCGAGCCCGG ACGAGGGCGG CGGCATGGCC AAGCTCGGCA CCCAGTTGAA GGCCGACCGT
GAATTCGCGC TGGCCTCGGC CTCGCTGCGG CAAGCTCTGC AGGAGATGCC GGAGATCACC
GAAATCTCCA AGAACGTGAT GTTCGAGGAA ACCCCGCAGG GGCTCAATCT GCAGATCGTC
GATCAGGAGG GGCGGCCGAT GTTTCCGGAC GGCTCGCCGC TGCCCTATGA GCGGACCATG
CTGCTGGTGC GCAAACTGGC GGCGCCGCTG CGCGCCACCG CGTTGCGAAT CTCGATCGTC
GGCCACACCT CGTCTACGGG GGCGCCGGGG CGCGACGATG ACGACGCCTT CGTGCTGTCG
TGGCAGCGCG CCAACACGGT GCGGCAGATC CTGAAGGGCG AGGGGCTGCC GAGCAGCCAC
GTATTCGCGG TGACCGGCAA GGCCGACAGC GAGCCGTTGT TTCCGGACGC GCCGTTGCTC
GCCGCCAACC GCCGCGTCAC CATCACGCTG ATGCGCGAGA GCCCGCCGAT GCCGCCGGGC
TTGCAGCCGT AA
 
Protein sequence
MALGRQGGNK KKPEEAGGHV GAWFVTFADL MGLLTGFFVM LVSFSHQDQY KLQIVAGSMR 
EAFGVQMDAR YSGVIEKDGL PTRGKVKNVE HIAPDQATNR PSPDEGGGMA KLGTQLKADR
EFALASASLR QALQEMPEIT EISKNVMFEE TPQGLNLQIV DQEGRPMFPD GSPLPYERTM
LLVRKLAAPL RATALRISIV GHTSSTGAPG RDDDDAFVLS WQRANTVRQI LKGEGLPSSH
VFAVTGKADS EPLFPDAPLL AANRRVTITL MRESPPMPPG LQP