| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2452 |
|---|
| Symbol | |
|---|
| ID | 3971382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2655153 |
|---|
| End bp | 2656832 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637925560 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_532322 |
|---|
| Protein GI | 90423952 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.930191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.727818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAG AGGCAGCGAC GGCTGAGGCA GGGCGCGATT TCATTCGCGA TATCGTTCAG
GCCGATCTCG ACTCCAAGAA ACACGCGCAG ATCGTGACGC GCTTCCCACC GGAGCCGAAC
GGCTACCTGC ACATCGGCCA CGCCAAGTCG ATCGCTTTGA ATTTCGGTAT TGCGCAGGAG
TTCGGCGGCC GCTGCCACCT GCGGTTCGAC GATACCAACC CGACCAAGGA AGAGCAAGAA
TACATCGATT CGATTCAGGC CGACGTGCAC TGGCTCGGCT ACGACTGGGG AACCGATCTG
TTTTACGCCT CGGATTATTT CGAGCGGCTG TACGGCTGGG CGGAAGCCCT GATCGAAGCC
GGGCACGCCT ATGTGGACGA CCAGTCGCAG GAGGAGATTC GCGTCAGCCG CGGCACGCTG
ACCGAGCCCG GCAAGAACTC GCCGTTTCGC GAGCGCAGCG TCGAAGAAAA TCTCGAGCTG
TTTCGCCGCA TGAAGGCCGG CGAATTTCCC AACGGCGCGC GGGTGCTGCG CGCCAAGATC
GACATGGCGG CGGGCAACAT CAACCTGCGC GACCCGGTGC TGTATCGCAT CCTGCACGCC
ACCCATCCGC GCACCGGCGA CGCCTGGTCG ATCTATCCGA GCTACGATTA CGCCCACGGC
CAGTCCGACG CGATCGAAGG CATCACCCAT TCGATCTGCA CGCTGGAATT CGAGGACCAT
CGGCCGCTGT ACGAGTGGCT GCTCGACAAG CTGCCGGTGC CGTCGAAGCC GCGGCAGTAT
GAATTCGCCC GGCTCAATCT GACCTACACG CTGTTGTCGA AACGGGTGCT CACCGAGCTG
GTGCGCCAGG GCCACGTCAA CGGCTGGGAC GATCCGCGGA TGCCGACCAT CGCCGGCCTG
AAGCGGCGCG GCGTGCCGCC GGCGGCGATC CGTGAATTCA TCAAGCGCAT CGGCGTGGCG
AAAGCCAACA GCGTGGTCGA TGTCGGCATG CTGGAGTTCT GCATCCGCGA AGAGCTCAAC
AAGAGCTCGC TGCGGCGGAT GGCGGTGCTG CGGCCGCTCA AGGTGGTGAT CGAGAATTAT
CCCGAAGGCG AGAGCGAAAC GCTGGAGGCC ATCAACCATC CTGATGATCC GGCCGCGGGA
AGCCGCAAGA TCACATTCGG CCGCGAATTG TGGATCGAAC AGGACGACTT CATGGAGACC
CCGGCGAAGA AGTTCTTCCG GCTATCGCCC GGCAAAGAGG TGCGGCTGCG CTACGCCTAT
TTCATCAAAT GCACCGACGT GGTGAAGAAC GCCGCCGGCG AAATCGTCGA GCTGCGCTGC
AGCTATGATC CGGCGACCCG CGGCGGCAAC GCGCCGGACG GCCGCAAGGT CAAAGCCACC
ATGCACTGGC TGTCCGCGGC CGACGCCGTG CCGGCGGAAA TCCGGGTCTA CAACCCGCTG
TTCGTCAACC CGTCGCCGGA TGCGGCCAAC TTTGCCGCCG ATCTCAATCC GCAGTCGCTG
GAAGTTCTGA GCGACGCGCG GGTCGAGCCG GCAGCCTTGC AGGCCGCGGC GGGCGAGGTG
ATGCAGTTCG AGCGGCAGGG CTATTTCGTG CCCGATCGGG AGTCCACGCC GGACAAGCCG
GTGTTCAACC GCACCATCGG GCTGCGCGAT ACGTTTGCCA AAGAGGTCGC CAAGGGCTGA
|
|---|
| Protein sequence | MTAEAATAEA GRDFIRDIVQ ADLDSKKHAQ IVTRFPPEPN GYLHIGHAKS IALNFGIAQE
FGGRCHLRFD DTNPTKEEQE YIDSIQADVH WLGYDWGTDL FYASDYFERL YGWAEALIEA
GHAYVDDQSQ EEIRVSRGTL TEPGKNSPFR ERSVEENLEL FRRMKAGEFP NGARVLRAKI
DMAAGNINLR DPVLYRILHA THPRTGDAWS IYPSYDYAHG QSDAIEGITH SICTLEFEDH
RPLYEWLLDK LPVPSKPRQY EFARLNLTYT LLSKRVLTEL VRQGHVNGWD DPRMPTIAGL
KRRGVPPAAI REFIKRIGVA KANSVVDVGM LEFCIREELN KSSLRRMAVL RPLKVVIENY
PEGESETLEA INHPDDPAAG SRKITFGREL WIEQDDFMET PAKKFFRLSP GKEVRLRYAY
FIKCTDVVKN AAGEIVELRC SYDPATRGGN APDGRKVKAT MHWLSAADAV PAEIRVYNPL
FVNPSPDAAN FAADLNPQSL EVLSDARVEP AALQAAAGEV MQFERQGYFV PDRESTPDKP
VFNRTIGLRD TFAKEVAKG
|
|---|
| |