| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2450 |
|---|
| Symbol | gltA |
|---|
| ID | 3971380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2652102 |
|---|
| End bp | 2653406 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925558 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_532320 |
|---|
| Protein GI | 90423950 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.444525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA CAACAAACAC CAAGAACGCC ACGCTCACGG TCGGCAACAA GACCTATGAT
TTCCCGATTC TCAGCGGGAC TGTCGGGCCT GATGTCGTCG ACATCAGCAA GCTGTACGCC
CAGGCCGGGA TGTTTACCTA CGATCCGGGC TTTACCTCGA CCGGCAGCTG CCAATCCAAA
ATCACCTACA TCGACGGCGA CGCCGGCATC CTGCAATATC GCGGCTATCC GATCGAGCAG
CTCGCCGAAA AGGGCGATTT CCTCGAGACC TGCTATCTGT TGCTGTACGG CGAATTGCCC
GACAAGGCCG CGAAGGAAGA CTTCGACACC CGGGTCACGC ACCACAACAT GGTGCACGAG
CAGATGGCGC GGTTCTTCCA GGGCTTCCGC CGCGACGCCC ACCCGATGGC GGTGATGGTG
GCCTCGGTCG GCGCGATGGC GGCGTTCTAT CACGACTCCA CCGACATCAC CGATCCGACC
CAGCGGATGA TCGCCTCGAT CCGCATGATC GCAAAAATTC CGACCCTGGC CGCGATGGCC
TACAAATATT CGGTCGGCCA ACCCTTCGTC TATCCGAAGA ACTCGCTGAG CTACGCCGCC
AACTTCCTGC GGATGTGCTT CGCCACGCCG TGCGAGGAAT ACGTCGTCAA CCCGGTGCTG
GCGCGCGCGC TCGACAAGAT CTTCACGCTG CACGCCGACC ACGAGCAGAA CGCCTCGACC
TCGACGGTGC GGATCGCCGG CTCGTCGGGC GCCAACCCGT TCGCCTGTAT CGCCGCCGGC
ATCGCCTGCC TGTGGGGACC GGCGCATGGC GGCGCCAACG AAGCCGCCTT GGCGATGCTC
AAGGAGATCG GTTCGGTCGA GAACATTCCC GACTTCATCA AGCGGGTGAA GGACAAGAAC
TCCTCGGTGC GGCTGATGGG CTTCGGTCAC CGCGTCTACA AGAACTACGA TCCGCGCGCC
AAGATCATGC AGCAGACCTG CCACGAGGTG CTGGCGGAGA CCGGCCACGG CGGCGATCCG
CTGCTCAGGG TGGCGATGGA GCTGGAGAAG ATCGCGCTCA GCGACGAGTA CTTCATCGAG
CGCAAGCTGT ACCCGAACGT CGACTTCTAT TCCGGCATCA CGCTGAAGGC GATGGGCTTC
CCGACCGACA TGTTCACCGT GCTGTTCGCG GTGGCCCGCA CCGTCGGCTG GATCAGCCAG
TGGAGCGAGA TGATCGAGGA TCCGCAGCAG AAGATCGGCC GTCCGCGGCA GCTCTACACC
GGCGCCACCC ACCGCGACTA CGTCGAGATC GACGCGCGCA AGTAA
|
|---|
| Protein sequence | MDATTNTKNA TLTVGNKTYD FPILSGTVGP DVVDISKLYA QAGMFTYDPG FTSTGSCQSK
ITYIDGDAGI LQYRGYPIEQ LAEKGDFLET CYLLLYGELP DKAAKEDFDT RVTHHNMVHE
QMARFFQGFR RDAHPMAVMV ASVGAMAAFY HDSTDITDPT QRMIASIRMI AKIPTLAAMA
YKYSVGQPFV YPKNSLSYAA NFLRMCFATP CEEYVVNPVL ARALDKIFTL HADHEQNAST
STVRIAGSSG ANPFACIAAG IACLWGPAHG GANEAALAML KEIGSVENIP DFIKRVKDKN
SSVRLMGFGH RVYKNYDPRA KIMQQTCHEV LAETGHGGDP LLRVAMELEK IALSDEYFIE
RKLYPNVDFY SGITLKAMGF PTDMFTVLFA VARTVGWISQ WSEMIEDPQQ KIGRPRQLYT
GATHRDYVEI DARK
|
|---|
| |