| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2443 |
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| Symbol | |
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| ID | 3971373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2643510 |
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| End bp | 2644661 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925551 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_532313 |
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| Protein GI | 90423943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.267885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.20072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG TTTTTCTAAA TAGTTTCAAC GTATTGAGCC ATGGCGTGAT CGGTTACGTC
ATTCCCTTTC TGTTTGTTTT GACGATCGTG GTTTTCTTCC ATGAACTGGG GCATTTCCTG
GTCGCCCGTT GGGCCGGGGT GAAAGTGCTG ACGTTCTCGC TCGGCTTCGG TCCGGAATTG
GTCGGCTTCA ACGACAAGCA CGGCACCCGC TGGAAGATCT CCGCGGTGCC GCTCGGCGGC
TACGTCAAAT TCTTCGGCGA CGAGAGCGAA GCGTCGACGC CCTCCAGCGC CGCGTTGTCG
GCGATGTCCG CGGCGGAACG CGAAGGCAGC TTTCACCACA AGAAAGTCGG CCCGCGGGCG
GCGATCGTCG CCGCCGGGCC GATCGCCAAT TTCCTGCTCT CGATCGCGAT TTTCGCCGCG
CTGTTCACGA TTTCAGGCCG GCCGATCACC AGTGCCAGGG TCGACACCGT GCAGGCCGAC
AGTGCGGCCG CCGCCGCCGG CTTTAAGCCC GGCGACGTCG TGCTGCAGAT CGGCGGCAAG
AAGATCGACA GTTTCACCGA GATGCAGCGC ACCGTCGGCA GCGAGGCGGG CCAAGAGCTG
AGCTTCACCA TCAAGCGCGG CGACGCCACG CTGGAACTTC GCGCCACTCC GGTGCTGAAG
GAAATCAAGG ACAGCTTCGG CAACGCGCAC CGGGTCGGCA TTCTCGGCAT CAGCCGCGCC
ACCAATCCGG GCGACGTGGT GACCGAGCGG GTGGACCCGG CGACCGCGCT GCTGCTTGGC
GTCAAGGAAA CCTGGTTCGT GGTCGATCGC ACGCTGGCCT ATATCGGCGG CATCTTCACC
GGCCGCGAGG CCGCCGATCA GCTCGGCGGG CCGCTGCGAA TCGCCCAGAT CTCCGGGCAG
GTCGCGACCT TCGGCATCTC GCCGCTGCTG CATCTGGCGG CGGTGCTGTC GGTGTCGATC
GGACTGCTCA ACCTGTTTCC GGTGCCGCTG CTCGATGGCG GACACCTTTT GTTCTATGCG
GTCGAGGCGG CGCGCGGCCG GCCGTTGTCG GAACGCGCCC AGGAAATGGG CTTTCGCATC
GGTTTAGGGC TGGTTTTGAT GCTGATGGTG TTCGCCACCT ACAATGATAT CTTGCATCTG
GCGGCGTCAT GA
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| Protein sequence | MPDVFLNSFN VLSHGVIGYV IPFLFVLTIV VFFHELGHFL VARWAGVKVL TFSLGFGPEL
VGFNDKHGTR WKISAVPLGG YVKFFGDESE ASTPSSAALS AMSAAEREGS FHHKKVGPRA
AIVAAGPIAN FLLSIAIFAA LFTISGRPIT SARVDTVQAD SAAAAAGFKP GDVVLQIGGK
KIDSFTEMQR TVGSEAGQEL SFTIKRGDAT LELRATPVLK EIKDSFGNAH RVGILGISRA
TNPGDVVTER VDPATALLLG VKETWFVVDR TLAYIGGIFT GREAADQLGG PLRIAQISGQ
VATFGISPLL HLAAVLSVSI GLLNLFPVPL LDGGHLLFYA VEAARGRPLS ERAQEMGFRI
GLGLVLMLMV FATYNDILHL AAS
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