| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2428 |
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| Symbol | |
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| ID | 3971416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2629422 |
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| End bp | 2630702 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925536 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_532298 |
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| Protein GI | 90423928 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.507047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0670699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG CCATGAGCGA GCCAGTTCGA ACCCCACCTT TCGCGCCATT CGAATGGCTG
CTGTCCGGAC GCTATTTGCG CGCGCGTCGC AAGGAGGGAT TCATCTCGGT GATCGCCGGG
TTTTCCTTCC TCGGCATCAT GCTGGGCGTC GCCACTTTGA TCATCGTGAT GGCGGTGATG
AACGGCTTCC GCAAGGAACT GCTGGACAAG ATTTTGGGCC TCAACGGCCA TCTGCTGGTG
CAGCCGTTGG AAAGCCCGCT GACCGACTGG AAGGACGTCG CCGAACGCAT CAACGGCGTC
GCCGGCATCA GGCTGGCCGC GCCCGTGGTC GACGGCCAGG CGTTGGCGTC GTCGCCGTTC
AACGCCTCCG GCGTGCTGGT GCGCGGCATG CGCGCCGACG ACCTCAACAA CCTCACCTCG
ATCGCCAAGA ACATCAAGCA AGGCACGCTG GAAGGCTTCG ACGAGGGGCA GGGCGTCGCA
ATTGGCCGCC GCCTTGCCGA CCAATTGTCG CTGCATGCCG GGGACAGCAT CACGCTGGTG
GCGCCGCGCG GCGCCGTGAC CCCGATGGGG ACCACGCCGC GGATCAAGCC CTATAAGGTC
ACCGCGGTGT TCGAGATCGG CATGTCGGAA TACGACAGTG GTTTCGTGTT CATGCCGCTG
CCGGAAGCCC AGGCCTATTT CAACCGCGCC TCCGACGTCA CCGCGATCGA AGTGTTCACC
AACAATCCCG ACAAGATCGA CGCCTTCCGC AAGAGCGTCA CCGAGGCGGC GGGCCGACCG
GTGTTCCTGG TCGACTGGCG GCAGCGCAAT TCCACCTTCT TCAACGCGCT GCAGGTCGAA
CGCAACGTGA TGTTTCTGAT CCTGACGCTG ATCGTGCTGG TGGCGGCGCT CAACATCGTC
TCCGGGCTGA TCATGCTGGT GAAGGACAAG GGCAGCGACA TCGCCATCCT GCGCACCATG
GGCGCCTCGC AAGGCTCGAT CATGCGGATC TTCCTGATCA CCGGCGCCGC CATCGGCGTG
GTCGGCACCT TGACCGGGTT TCTGGTCGGC CTCCTGGTGT GTTTGAACAT CGAGACCATC
CGCCAATTCC TGTCCTGGCT GACCAACACC GAGCTGTTCT CGCCGGAACT GTATTTCCTG
TCGCGGCTGC CGGCCGAAAT CGACGTCGGC GAAACCGCCG CGGTGGTGAT CATGGCGTTG
ACGTTGTCAT TCCTGGCGAC GCTGTATCCG TCGTGGCGCG CGGCCAAGCT CGATCCCGTC
GAAGCGTTGA GGTACGAGTG A
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| Protein sequence | MDEAMSEPVR TPPFAPFEWL LSGRYLRARR KEGFISVIAG FSFLGIMLGV ATLIIVMAVM
NGFRKELLDK ILGLNGHLLV QPLESPLTDW KDVAERINGV AGIRLAAPVV DGQALASSPF
NASGVLVRGM RADDLNNLTS IAKNIKQGTL EGFDEGQGVA IGRRLADQLS LHAGDSITLV
APRGAVTPMG TTPRIKPYKV TAVFEIGMSE YDSGFVFMPL PEAQAYFNRA SDVTAIEVFT
NNPDKIDAFR KSVTEAAGRP VFLVDWRQRN STFFNALQVE RNVMFLILTL IVLVAALNIV
SGLIMLVKDK GSDIAILRTM GASQGSIMRI FLITGAAIGV VGTLTGFLVG LLVCLNIETI
RQFLSWLTNT ELFSPELYFL SRLPAEIDVG ETAAVVIMAL TLSFLATLYP SWRAAKLDPV
EALRYE
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