| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2425 |
|---|
| Symbol | |
|---|
| ID | 3971413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2625745 |
|---|
| End bp | 2626287 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637925533 |
|---|
| Product | nuclear export factor GLE1 |
|---|
| Protein accession | YP_532295 |
|---|
| Protein GI | 90423925 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0453347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0660854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG CGATGACGGG GATGCGCTGC GCGCGCGTTG CGCTGGTGGC GGTTGTGGTG
GGCGTCGGAT CGACCGCGGC CGACGCCCAC GTGACCATCC GCCCCAATGA GGCCGCCGCC
GGCAGCTATG TCGAGGCCGC GCTGAACGTC CCCCACGGCT GCGACGGCAG CGCCACGGTC
GCGGTGCGGG TGAAGATCCC GAACGGCGTG ATGTCGGTGA AGCCGCAGAT GAAGCCGGGC
TGGAGCGTCG AGATCAAGAA ACGCAAACTC GACGCCCCGG TCGCCGGGCT GCACGGCAAG
ACCATCACCG AAGTGGTCGA CGAAGTGTCG TGGCGCGGCG GCCCGTTGCC GGACCATCTC
TACGACAGCT TCGGCCTGCA GATGAAGACG CCCGACGGCG CGGGGCAGAC GCTGTACTTT
CCGGTGGTGC AGGAATGCGA GCAGGGGGTG AACCGCTGGA TCGAGATTCC TGCGGCCGGT
CAATCGGCCG ACAAGCTGCA CGAACCGGCG CCGGTGCTGC GATTGAAGCC GAAGGCGCCT
TGA
|
|---|
| Protein sequence | MSGAMTGMRC ARVALVAVVV GVGSTAADAH VTIRPNEAAA GSYVEAALNV PHGCDGSATV
AVRVKIPNGV MSVKPQMKPG WSVEIKKRKL DAPVAGLHGK TITEVVDEVS WRGGPLPDHL
YDSFGLQMKT PDGAGQTLYF PVVQECEQGV NRWIEIPAAG QSADKLHEPA PVLRLKPKAP
|
|---|
| |