Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2425 |
Symbol | |
ID | 3971413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2625745 |
End bp | 2626287 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637925533 |
Product | nuclear export factor GLE1 |
Protein accession | YP_532295 |
Protein GI | 90423925 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0453347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0660854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCG CGATGACGGG GATGCGCTGC GCGCGCGTTG CGCTGGTGGC GGTTGTGGTG GGCGTCGGAT CGACCGCGGC CGACGCCCAC GTGACCATCC GCCCCAATGA GGCCGCCGCC GGCAGCTATG TCGAGGCCGC GCTGAACGTC CCCCACGGCT GCGACGGCAG CGCCACGGTC GCGGTGCGGG TGAAGATCCC GAACGGCGTG ATGTCGGTGA AGCCGCAGAT GAAGCCGGGC TGGAGCGTCG AGATCAAGAA ACGCAAACTC GACGCCCCGG TCGCCGGGCT GCACGGCAAG ACCATCACCG AAGTGGTCGA CGAAGTGTCG TGGCGCGGCG GCCCGTTGCC GGACCATCTC TACGACAGCT TCGGCCTGCA GATGAAGACG CCCGACGGCG CGGGGCAGAC GCTGTACTTT CCGGTGGTGC AGGAATGCGA GCAGGGGGTG AACCGCTGGA TCGAGATTCC TGCGGCCGGT CAATCGGCCG ACAAGCTGCA CGAACCGGCG CCGGTGCTGC GATTGAAGCC GAAGGCGCCT TGA
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Protein sequence | MSGAMTGMRC ARVALVAVVV GVGSTAADAH VTIRPNEAAA GSYVEAALNV PHGCDGSATV AVRVKIPNGV MSVKPQMKPG WSVEIKKRKL DAPVAGLHGK TITEVVDEVS WRGGPLPDHL YDSFGLQMKT PDGAGQTLYF PVVQECEQGV NRWIEIPAAG QSADKLHEPA PVLRLKPKAP
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