| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2415 |
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| Symbol | |
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| ID | 3971499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2615620 |
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| End bp | 2617686 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925524 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_532286 |
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| Protein GI | 90423916 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0841593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0146586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGG CCATCGTATT CCTGCCGCTG ATCGGCGCGC TGCTCGCAGC CGCGATCGCG
CTGTTCGGCG CCCACGCCCG CAACCCGAGT GGCGACACCG TCGAGCACGA CGCCGCGCAT
GGCCATGCGG CGCCGACCGG CGACGCCGCT GTGATCCATG CCGCGCATGA CGACCACGGC
CACGATCATC CGGTCGAAAC GCCGGCCGTG GGCTCCCGCG CCGCCGAGCT GATCACCACT
GGTCTCTTGC TGGTTGCGGC CGGGCTGTCC TGGCTGGCGC TGGTGGACGT CGGCTTCATG
CATCACGACG CCCGGATTCC GCTGTTTCCC TGGATCAACT CCGGCGACCT GCAGGTGGCG
TGGTCGCTGC GGGTCGACAC CCTGACCGCG GTGATGCTGG TGGTGGTCAA CACCGTGTCG
TCGCTGGTTC ACCTATATTC GATCGGCTAC ATGAACGAGG ACCCGCATCG GCCGCGGTTC
TTCGCCTATC TGTCGCTGTT CACCTTCGCG ATGCTGATGC TGGTGACCGC CGACAATCTG
GTGCAGATGT TCTTCGGTTG GGAGGGCGTC GGTCTCGCCA GCTATCTGCT GATCGGATTC
TGGTACCAAA AGCCCGAGGC CAATGCCGCC GCGATCAAGG CCTTCGTGGT CAATCGGATC
GGCGATTTCG GCTTCCTGCT CGGCATCTTC GCGATCTTTA TGCTGGTGGG CTCGATCGAT
TTCGAGACCA TCTTCGCCGC GGCGCCGGGG CTCACCGGCA AGACAATTAA CTTCTTCGGC
TGGCACGCCG ACGCGCTGAC GCTGACCTGC CTGTTCCTGT TCATGGGCGC GATGGGCAAA
TCCGCCCAGT TCCTGCTGCA CACCTGGCTG CCGGACGCGA TGGAGGGCCC GACCCCGGTG
TCGGCGCTGA TCCACGCCGC CACCATGGTG ACCGCGGGCG TGTTCATGGT GGCCCGGCTG
TCGCCGCTGT TCGAACTGGC ACCGGACGCG CAGAACGTGG TGATCTTCTT CGGCGCCACC
ACCGCGTTCT TCGCCGCGAC CATCGGCCTG GTGCAGAACG ACATCAAACG CATCGTCGCC
TATTCGACCT GCTCGCAGCT CGGCTACATG TTCGTGGCGA TGGGGACGGG GGCCTATTCG
GTCGGCATGT TCCACCTGTT CACCCACGCC TTCTTCAAGG CGCTGCTGTT CTTGGGCTCG
GGTTCGGTGA TCCACGCGAT GCACCACGAG CAGGACATCC GCAAGATGGG CGGGCTGAAG
GACAAGATCC CCTTCACCTA CATCGTGATG GTGATCGGCA CCCTGGCTTT GACCGGCTTC
CCGCTCACCG CCGGCTATTT CTCCAAGGAT GCCATCATCG AGGCGGCGTT CGCCTCGCAC
AAATCCGTGG CGTTTTACGG CTTCCTGATG ACGGTGATCG CCGCCGGCCT GACCTCTTTC
TATTCTTGGC GGCTGATCTT CAAGACCTTC CACGGCACGC CGCACGACCA GAAGAATTAC
GACGCCGCGC ATGAGAGCCC GTATTGGATG CTGATCCCGC TGGTGGTGCT GGCCGCCGGG
TCGATCCTCG CGGGCTTTCC GTTCAAGGAA GTGTTCGCCG GCCACGGCGT CGGCGAGTTC
TTCCGCGAGT CGCTGAAGAT GAACCCGCAC ATCATCGACG AGATGCACCA CATTCCGGTG
GCGGTGGCCT ATTTGCCGAC CGCGATGATG GCGCTGGGCT TCGTGGTGTC GTGGATGTTC
TACATCCGCA AGCCCTATCT GCCGGTCGAG CTCGCCAACC AGCACCAGCT GCTGTACAAA
TTCCTGCTCA ACAAATGGTA CTTCGACGAA TTGTACGACC TGATCTTCGT GCGGCCGGCG
AAGTGGATCG GCCGCTTCCT GTGGAAGGCC GGCGATGGCA CCATCATCGA CGGGCTGGGA
CCGGACGGCA TCTCCGCCCG GGTGCTCGAT ATCACCCGCG GCGCGGTGCG GCTGCAGACC
GGTTATCTCT ACCACTACGC CTTCGCGATG CTGGTCGGTG TCGCCGGGCT GATTACGTGG
TTCATGCTCG GCGGGGGGGG CCGGTAA
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| Protein sequence | MIQAIVFLPL IGALLAAAIA LFGAHARNPS GDTVEHDAAH GHAAPTGDAA VIHAAHDDHG
HDHPVETPAV GSRAAELITT GLLLVAAGLS WLALVDVGFM HHDARIPLFP WINSGDLQVA
WSLRVDTLTA VMLVVVNTVS SLVHLYSIGY MNEDPHRPRF FAYLSLFTFA MLMLVTADNL
VQMFFGWEGV GLASYLLIGF WYQKPEANAA AIKAFVVNRI GDFGFLLGIF AIFMLVGSID
FETIFAAAPG LTGKTINFFG WHADALTLTC LFLFMGAMGK SAQFLLHTWL PDAMEGPTPV
SALIHAATMV TAGVFMVARL SPLFELAPDA QNVVIFFGAT TAFFAATIGL VQNDIKRIVA
YSTCSQLGYM FVAMGTGAYS VGMFHLFTHA FFKALLFLGS GSVIHAMHHE QDIRKMGGLK
DKIPFTYIVM VIGTLALTGF PLTAGYFSKD AIIEAAFASH KSVAFYGFLM TVIAAGLTSF
YSWRLIFKTF HGTPHDQKNY DAAHESPYWM LIPLVVLAAG SILAGFPFKE VFAGHGVGEF
FRESLKMNPH IIDEMHHIPV AVAYLPTAMM ALGFVVSWMF YIRKPYLPVE LANQHQLLYK
FLLNKWYFDE LYDLIFVRPA KWIGRFLWKA GDGTIIDGLG PDGISARVLD ITRGAVRLQT
GYLYHYAFAM LVGVAGLITW FMLGGGGR
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