Gene RPC_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2414 
Symbol 
ID3971498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2615301 
End bp2615612 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content59% 
IMG OID637925523 
ProductNADH-ubiquinone oxidoreductase, chain 4L 
Protein accessionYP_532285 
Protein GI90423915 
COG category[C] Energy production and conversion 
COG ID[COG0713] NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0025365 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00922504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCACGG TCGGTCTCGG ACATTTCCTC TCGGTCGCGG CGATCCTGTT CACGATCGGC 
ACGCTCGGCA TCTTTCTCAA CCGCAAGAAC GTCATCGTCA TCCTGATGTC GATCGAGCTG
ATGCTGCTGG CGGTGAATAT CAACCTGGTG GCGTTCTCGG CGTTCCTGCA CGACATCGTC
GGCCAGGTAT TCGCGTTGCT GGTGCTGACG GTCGCCGCCG CGGAAGCGGC GATCGGACTG
GCGGTGCTGG TGGTGTATTT CCGCAATCGC GGCTCGATCG CGGTTAAAGA CATCAATCTG
ATGAAGGGCT GA
 
Protein sequence
MITVGLGHFL SVAAILFTIG TLGIFLNRKN VIVILMSIEL MLLAVNINLV AFSAFLHDIV 
GQVFALLVLT VAAAEAAIGL AVLVVYFRNR GSIAVKDINL MKG