| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2410 |
|---|
| Symbol | |
|---|
| ID | 3971494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2611049 |
|---|
| End bp | 2613127 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637925519 |
|---|
| Product | NADH dehydrogenase subunit G |
|---|
| Protein accession | YP_532281 |
|---|
| Protein GI | 90423911 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.390379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00632886 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC TCATCGTCGA CGGCAAGGAA ATCGAGGTCC CGCCGGAGTA CACGCTGATG
CAGGCCTGCG AGGCCGCCGG CGCGGAAATT CCGCGGTTCT GCTATCACGA GCGGCTGTCG
ATCGCCGGCA ATTGCCGGAT GTGTCTGGTC GAGGTGAAGG GCACGCCGAA GCCGGTGGCG
AGCTGCGCCT GGGGCGTGCG CGACTGCCGG CCGGGTCCCA AGGGCGAGCC GCCGGAAATC
TCCACCCGCT CGCCGATGGT GAAGAAGGCC CGCGAAGGCG TGATGGAATT CCTGCTGATC
AACCATCCGT TGGATTGTCC GATCTGCGAC CAGGGCGGCG AGTGCGACCT GCAGGACCAG
GCGATGGGCT ACGGCGTCGA CACCAGCCGG TTCGCCGAGA ACAAGCGCGC GGTCGAGGAC
AAGTATCTCG GCGTGCTGGT CAAGACCTCG ATGAACCGCT GCATCCAGTG CACCCGCTGC
GTGCGTTTCG CCGCCGAAGT CTGCGGCCTG CCGGAGATGG GCGCGATCGG CCGCGGCGAG
GACGTCGAGA TCACCACCTA TCTGGAAAGC GCGCTGACCT CGGAGCTGCA GGGCAATCTG
GTCGACATCT GCCCGGTCGG TGCCTTGACG TCGAAGCCCT ATGCGTTCGC GGCGCGACCC
TGGGAACTCG GCAAGACCCA GTCGATCGAC GTGATGGACG CGGTCGGCTC GGCGATCCGG
GTCGATACGA GGGGCCGCGA AGTGATGCGG ATCCTGCCGC GCGTCAACGA GGCGGTGAAC
GAGGAGTGGA TCTCCGACAA GACCCGCCAC ATCGTCGATG GCCTGCGCGC CCAGCGGCTC
GACCGGCCCT ATGTGAGGGA GAATGGCAAG CTGCGCGCGG CGAGCTGGTC GGAAGCGTTT
GCGGCGATCG CCGCCAAGCT CAAGGACGTC AAGGGCAAGC GGATCGGCGC GATCGCCGGC
GACCTCGCCG CGGTCGAAGA GATGTTCGCG CTGAAGGACC TGCTGACCCG GCTCGGCTCG
GCCAATCTCG CAACCGAGGC CACCCACGCC TTCGACCCGA GCCTTGGTCG CGCCTCCTAC
ATCTTCAACC CGACCATCGC CGGCATCGAG CAGGCCGATG CGCTGTTGAT CATCGGCTGC
AACCCGCGCA GGGAAGCCGC GGTGCTGAAC GCCCGGATCC GCAAGCGCTG GCGCACCGGC
CAGTTGAAGA TCGCCGTGAT CGGCGATCAC GCCGAGCTGA CCTACAAATA CGACTACCTC
GGAGCCGGCG TGGATACGTT GAGCGAGTTG GCCGCCGGCA AACAGTCGTT CGCCGAGGTG
CTGAAGGGCG CCAACAACCC GATCGTGCTG GTCGGCGCCG GCGTCACCGC GCGCTCCGAC
GGCGCGGCGC TGCTGGCGAT GGCCGCGAAG CTTGCGAACG ATATCGGTGC GGTCAAGGAC
GGCTGGAACG GCTTTGCGGT CTTGCACAGT GCGGCCTCCA GCGTCGGCGC GCTCGACATC
GGCTTTGCGC CGGGCGAGGG CGGGCTGACT GCGGCGCAGA TGGCCGCAGA AGGCGCGCTC
GACGTGGTGT TTTCGCTCGG CGCCGACGAG ATCAAGCTGC CGGCCGATGC CTTCGTGGTC
TATATCGGCA CCCACGGCGA CCGCGGCGCG CATCGCGCCG ACGTCATCCT GCCGGGTGCC
GCCTACACCG AGAAGTCTGC GATCTACGTC AACACCGAAG GCCGAGTGCA GATCACCGGC
CGCGCGGCGT TTCCGCCGGG TGAGGCGCGC GAGGACTGGG CGATCGTTCG TGCCTTGTCC
GACGCGCTCG GCGCCACGCT GCCGTATGAT TCCCTTGGCG CGCTGCGCAA GGCGCTGACT
GAAAAGGTGC CGCATCTGTT GCGGATCGAT CAGATCGCCC CGGCGGATCC GGCGGCGCTC
GCCGTGCTCG CGCGGCGCGG CGGCGGCGCG GTCGGCAAGG CGCCGCTGCT GTCGCCGATC
GGCGACTTCT ACCTGACCAA CCCGATCGCC CGCGCTTCGG CGGTGATGGC GGAATGTTCG
CGCGTGGCCT CCGGCCAGAT CTTGACCGCG GCGGAGTGA
|
|---|
| Protein sequence | MIKLIVDGKE IEVPPEYTLM QACEAAGAEI PRFCYHERLS IAGNCRMCLV EVKGTPKPVA
SCAWGVRDCR PGPKGEPPEI STRSPMVKKA REGVMEFLLI NHPLDCPICD QGGECDLQDQ
AMGYGVDTSR FAENKRAVED KYLGVLVKTS MNRCIQCTRC VRFAAEVCGL PEMGAIGRGE
DVEITTYLES ALTSELQGNL VDICPVGALT SKPYAFAARP WELGKTQSID VMDAVGSAIR
VDTRGREVMR ILPRVNEAVN EEWISDKTRH IVDGLRAQRL DRPYVRENGK LRAASWSEAF
AAIAAKLKDV KGKRIGAIAG DLAAVEEMFA LKDLLTRLGS ANLATEATHA FDPSLGRASY
IFNPTIAGIE QADALLIIGC NPRREAAVLN ARIRKRWRTG QLKIAVIGDH AELTYKYDYL
GAGVDTLSEL AAGKQSFAEV LKGANNPIVL VGAGVTARSD GAALLAMAAK LANDIGAVKD
GWNGFAVLHS AASSVGALDI GFAPGEGGLT AAQMAAEGAL DVVFSLGADE IKLPADAFVV
YIGTHGDRGA HRADVILPGA AYTEKSAIYV NTEGRVQITG RAAFPPGEAR EDWAIVRALS
DALGATLPYD SLGALRKALT EKVPHLLRID QIAPADPAAL AVLARRGGGA VGKAPLLSPI
GDFYLTNPIA RASAVMAECS RVASGQILTA AE
|
|---|
| |