| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2408 |
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| Symbol | |
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| ID | 3971492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2609472 |
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| End bp | 2610797 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925517 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_532279 |
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| Protein GI | 90423909 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0121136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG ACAAGGACCG CATCTTCCGC AATCTGTACG GCCAGGGCGA CTGGGGCCTC
GAAGGCGCGC GCCGCCGCGG CAGCTGGGAC GGCACCAAGG CGATCATCGA AAAAGGTCGC
GACTGGATCA TCAACGAGAT GAAGACCTCC GGGCTGCGCG GCCGCGGCGG CGCCGGCTTC
CCCACCGGAA TGAAATGGTC GTTCATGCCG AAGGAGTCGA CCGACGGCCG ACCGAGCTAC
CTCGTGGTCA ACGCCGACGA GTCCGAGCCC GGCACCTGCA AGGATCGCGA GATCATGCGG
CACGACCCGC ACGTGCTGGT CGAGGGCTGC CTGCTCGCCA GCTTCGCGAT GGGCGCCAAG
GTCTGCTACA TCTATGTCCG CGGCGAATTC ATCCGCGAGC GCGAGCATCT GCAGGCGGCG
GTCGATCAGG CCTATGAGGC CAAGCTGATC GGCCAGGACA ATATTCACGG CTGGCCGTTC
GAGCTCTATG TCACGCACGG CGCCGGCGCT TATATCTGCG GCGAGGAAAC CGCACTGCTG
GAAAGCCTGG AAGGCAAGAA GGGCCAGCCG CGGCTGAAGC CGCCGTTCCC GGCCAACGTC
GGTCTCTATG GCTGCCCGAC CACGGTCAAC AACGTCGAGT CGATCGCGGT GGCGCCCGAC
ATCCTGCGCC GCGGCGCGGC CTGGTTCTCC TCGATCGGCC GACCGAACAA TGTCGGCACC
AAGCTGTTCG GCATCTCCGG CCACGTCAAC ACGCCCTGCG TCGTCGAAGA GGCGATGGGC
ATTCCGTTCC GCGAACTGAT CGAAAAGCAC GGCGGCGGGA TTCGCGGCGG CTGGGACAAT
CTGTTGGCGA TCATTCCCGG CGGCGCGTCG TGCCCGTTGA TTCCGGCCGC CGATTGCGGC
GAGCTGATCA TGGATTTCGA CGGCACCCGC GCGGTGAAGT CCAGCCTCGG CACCGCCGGC
GTCATCGTGA TGGACAAGTC GACCGACGTG GTCGCGGCGA TCGCGCGCAT CAGCTACTTC
TTCAAGCACG AGAGCTGCGG CCAGTGCACG CCGTGCCGCG AGGGCACCGG CTGGATGTGG
CGGGTGCTGT CGCGCATGGT CGAGGGCCGC GCCCACAAGC GCGAGATCGA CATGCTGCTC
GAGGTCACCA AGCAGGTCGA GGGTCACACC ATCTGCGCGC TGGGCGACGC CGCGGCGTGG
CCGATCCAGG GCCTGATCCG CGCGTTCCGG CCGGAGATCG AGCGCCGCAT CGACGACTTC
TCGCGCCGCG CCGCGCTCGA CGACCAGGGC ATCCTCGATC CCGCGCATCT GGCCGCGGCG
GAGTAG
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| Protein sequence | MLDDKDRIFR NLYGQGDWGL EGARRRGSWD GTKAIIEKGR DWIINEMKTS GLRGRGGAGF
PTGMKWSFMP KESTDGRPSY LVVNADESEP GTCKDREIMR HDPHVLVEGC LLASFAMGAK
VCYIYVRGEF IREREHLQAA VDQAYEAKLI GQDNIHGWPF ELYVTHGAGA YICGEETALL
ESLEGKKGQP RLKPPFPANV GLYGCPTTVN NVESIAVAPD ILRRGAAWFS SIGRPNNVGT
KLFGISGHVN TPCVVEEAMG IPFRELIEKH GGGIRGGWDN LLAIIPGGAS CPLIPAADCG
ELIMDFDGTR AVKSSLGTAG VIVMDKSTDV VAAIARISYF FKHESCGQCT PCREGTGWMW
RVLSRMVEGR AHKREIDMLL EVTKQVEGHT ICALGDAAAW PIQGLIRAFR PEIERRIDDF
SRRAALDDQG ILDPAHLAAA E
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