| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2406 |
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| Symbol | |
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| ID | 3971490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2608441 |
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| End bp | 2609238 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925515 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_532277 |
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| Protein GI | 90423907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00979437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAACGC CTCGCGGCGG GTTCAATGAG AGACTTAAGA TAATGGCCGT CCGTCGTTTG
GCACCCAAGG AATTGCAGCC CGAGAGCTTC GCCTTCACCG AGGAGAATCT CGCATGGGCG
CAGCGCGAGA TCGCGAAATA CCCGCCGGGC CGGCAGGCCT CCGCGGTGAT CGCGATCATG
TGGCGGGCGC ACGAACAACT CGGCGGCTGG ATCACCGAAG CCGCGATCCG CGCGGTCGCC
GATCTGTTGC AGATGCCGCA TATCCGCGCG CTGGAGATCG CCACCTTCTA CACGATGTTT
CAGCTGCAGC CGGTCGGCAA GAAGGCCCAC GTCCAGGTCT GCGGCACCAC GCCGTGCCGA
TTGCGCGGCG CCGAGGACAT CATCAAGGTC TGCAAGAACC GGATCCACCA CGAGCCGTTT
CATCTGTCGG CCGACGGCAA TTTCAGCTGG GAAGAGGTCG AGTGCCTCGG CTCCTGCGTC
AACGCCCCGA TGGTGATGAT CACCAAGGAC ACCTACGAGG ATCTGACGCC GGAAAGTTTC
GGTAAGGTGC TGGATGGTTT TGCCAGCGGC AACTTCCCGA CCCCGGGTCC GCAGAATGGC
CGACAGTTCG CCGCGCCCGA AGGCGGCCCG CGCGTGCTGA AGTCGGTCGG CGCGCCGGAC
ACTGACCCGG ACCACGGCGC GGTGCCGCAC CCGGTGCTGA CCGACGCCGA GGCCAAGAAA
CCGGGCGAGG CGGCCAACGT TCAGGAACGT CCGTCGCCGA AGCCGCCGGC GGACGACGCC
ACCCGGAAGG ATCGATGA
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| Protein sequence | MPTPRGGFNE RLKIMAVRRL APKELQPESF AFTEENLAWA QREIAKYPPG RQASAVIAIM
WRAHEQLGGW ITEAAIRAVA DLLQMPHIRA LEIATFYTMF QLQPVGKKAH VQVCGTTPCR
LRGAEDIIKV CKNRIHHEPF HLSADGNFSW EEVECLGSCV NAPMVMITKD TYEDLTPESF
GKVLDGFASG NFPTPGPQNG RQFAAPEGGP RVLKSVGAPD TDPDHGAVPH PVLTDAEAKK
PGEAANVQER PSPKPPADDA TRKDR
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