| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2402 |
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| Symbol | |
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| ID | 3971486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2605183 |
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| End bp | 2605782 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925511 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_532273 |
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| Protein GI | 90423903 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0037532 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAGACC TCGCGGAACT CGGCGAAACC ATCAAGGCGG CGCTGCCGGC AGCGGTCAGC
AACGCATCGA TCGCGTTCGG CGAACTGACG CTGACCGTCG ATGCCGCCAA GATCGTCGAG
GTGGTGCGGT TTCTGCGCGA CGATCCGCGC TGCCGTTTCA TCAGCCCGAT CGACGTCACC
GCGGTCGACT ATCCCGGCCG CGCCAATCGC TTCGACGTGG TCTGGCATTT CCTGTCGCCG
TCGCTGAACA CCCGGATCCG GCTGCGCGCC GAAGCCAGCG AAACCACCCA GGTGCCCTCG
CTGATCGACC TGTTCCCCGG CGTCGACTGG TTCGAACGCG AGGCCTACGA TCTTTACGGC
GTGATCTTCA CCGGCCACCC CGACATGCGG CGGATCCTCA CCGACTACGG CTTCGACGGC
CATCCGCTGC GCAAGGACTT TCCGCTCTCC GGCTTCGTCG AGGTGCGTTA CGACGACGAC
GAGAAGCGGG TGGTGTACGA GCCGGTGCGG CTCAACCAGG AATTCCGCAA ATTCGATTTC
CTCTCGCCCT GGGAAGGCGC GGACTATCCG CTGCCCGGCG ACGAGAAAAG AAGCGAATAG
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| Protein sequence | MTDLAELGET IKAALPAAVS NASIAFGELT LTVDAAKIVE VVRFLRDDPR CRFISPIDVT
AVDYPGRANR FDVVWHFLSP SLNTRIRLRA EASETTQVPS LIDLFPGVDW FEREAYDLYG
VIFTGHPDMR RILTDYGFDG HPLRKDFPLS GFVEVRYDDD EKRVVYEPVR LNQEFRKFDF
LSPWEGADYP LPGDEKRSE
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