Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2393 |
Symbol | clpX |
ID | 3971530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2596778 |
End bp | 2598052 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637925500 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_532264 |
Protein GI | 90423894 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0951705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0942361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGG TCGGCACGAG CGACTCCAAG AACACGCTGT ATTGCTCGTT CTGTGGAAAG AGCCAGCACG AAGTCCGCAA GCTGATTGCG GGACCCACCG TATTCATCTG CGACGAATGC GTTGAGCTGT GCATGGACAT CATCCGCGAG GAGAACAAAT CCTCACTGGT GAAATCGCGC GACGGAATTC CGACCCCGAA GGAAATCTGC AAGGTTCTCG ACGATTACGT GATCGGCCAG AGCCATGCCA AGAAGGTTCT CTCGGTCGCG GTGCATAACC ACTACAAGCG CCTCAACCAC CAGACCAAGC ACAACGACGT CGAATTGGCG AAGTCGAACA TCCTGTTGAT CGGCCCGACC GGGTCCGGCA AGACGCTGCT CGCGCAGACG CTCGCCCGCA TCCTCGACGT GCCGTTCACG ATGGCCGATG CGACGACGCT GACCGAAGCC GGCTATGTCG GCGAGGACGT CGAGAACATC ATCCTGAAGC TGCTGCAGTC GGCCGACTAC AACGTCGAGC GGGCGCAGCG CGGCATCGTC TACATCGACG AAATCGACAA GATCTCGCGC AAGTCCGACA ACCCCTCGAT CACCCGCGAC GTCTCGGGCG AGGGCGTGCA GCAGGCCTTG CTGAAGATCA TGGAAGGCAC CGTCGCGTCG GTGCCGCCGC AGGGCGGCCG CAAGCATCCG CAGCAGGAAT TCCTGCAGGT CGACACCACC AACATCCTGT TCATCTGCGG CGGCGCGTTC TCGGGTCTCG AGAAGATCAT CTCCGCACGC GGTCGGTCGA CCTCGATCGG CTTCGCGGCG CAGGTGCTGG CGCCGGAAGA TCGCCGCACC GGCGAAATCT TCCGCCACGT CGAGCCCGAG GATCTGCTGA AGTACGGCCT GATCCCGGAA TTCGTCGGTC GTTTGCCGGT GGTGGCGACG CTCGAGGATC TCGACGAGGC TTCGCTGAAG AAGATCCTCA CCGATCCGAA GAACGCGCTG GTCAAGCAGT ACCAGCGGTT GTTCGAAATG GAGAACATCG AGCTGACCTT CGCCGACGAG GCGCTTGGCG CGGTGGCCCG CAAGGCGATC GAGCGCAAGA CCGGCGCGCG CGGCTTGCGC TCCATCCTGG AGAGCATCCT GCTCGAGACC ATGTTCGATC TTCCGGGCCT GGAAGGCGTC GAAGAGGTGG TGATCTCGCG CGAGGTCGTC GAAGGTACGG CGCGGCCGCT GTACATCTAC GCCGACCGCT CCGATCGGAC CGCCGAAAGC AGCGCCAGCG CCTGA
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Protein sequence | MSKVGTSDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR DGIPTPKEIC KVLDDYVIGQ SHAKKVLSVA VHNHYKRLNH QTKHNDVELA KSNILLIGPT GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQSADY NVERAQRGIV YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT NILFICGGAF SGLEKIISAR GRSTSIGFAA QVLAPEDRRT GEIFRHVEPE DLLKYGLIPE FVGRLPVVAT LEDLDEASLK KILTDPKNAL VKQYQRLFEM ENIELTFADE ALGAVARKAI ERKTGARGLR SILESILLET MFDLPGLEGV EEVVISREVV EGTARPLYIY ADRSDRTAES SASA
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