| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2392 |
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| Symbol | |
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| ID | 3971529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2595744 |
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| End bp | 2596376 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925499 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_532263 |
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| Protein GI | 90423893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.334623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGATC CGGTGGAAAC CTACATGAAC CTCGTGCCGA TGGTGGTCGA ACAGACCAAC
CGCGGCGAGC GGGCCTACGA CATCTTCTCG CGCCTGCTGA AGGAGCGCAT CATCTTCGTC
ACCGGGCCGG TCGAGGACGG CATGTCGACG CTGACCGTGG CGCAGCTGCT GTTTCTGGAA
GCCGAGAATC CGAAGAAGGA AATCTCGATG TACATCAACT CGCCCGGCGG GGTGGTGACC
TCGGGCCTGG CGATCTACGA CACCATGCAG TTCATCCGCC CGCCGGTGTC GACGCTGTGC
ACCGGGCAGG CCGCCTCGAT GGGCTCGCTG CTGTTGGCCG CCGGCCATCC CGACATGCGG
TTTTCGCTGC CGAACTCCCG GATCATGGTG CATCAGCCGT CCGGCGGATT CCAGGGTCAG
GCCACCGACA TCATGCTGCA CGCCCAGGAG ATCCTCAACC TGAAGAAGCG GCTCAACGAG
ATCTACGTCA AGCACACCGG GCAGACCTAC AAGGCGATCG AGGACGCGCT GGAGCGCGAC
AAGTTCCTCA CCGCCGACAT GGCCCGCGAC TTCGGCATCG TCGACAAGGT GATCGACAAG
CGCTCCGAGG AACCGACGCC GAAGGCGCCG TAA
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| Protein sequence | MRDPVETYMN LVPMVVEQTN RGERAYDIFS RLLKERIIFV TGPVEDGMST LTVAQLLFLE
AENPKKEISM YINSPGGVVT SGLAIYDTMQ FIRPPVSTLC TGQAASMGSL LLAAGHPDMR
FSLPNSRIMV HQPSGGFQGQ ATDIMLHAQE ILNLKKRLNE IYVKHTGQTY KAIEDALERD
KFLTADMARD FGIVDKVIDK RSEEPTPKAP
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