Gene RPC_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2373 
Symbol 
ID3971545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2572977 
End bp2574023 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID637925480 
Producthypothetical protein 
Protein accessionYP_532245 
Protein GI90423875 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.424194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC GCAAGCACAA TGCCGCCTAT GAGGCCTGGC TCGGCCGCCA ATGCGACGTG 
GTCGCCCGCG ACGTCGCCAA GAAACACAAG CGGATGAAGA AGAGCGCGTT CCTGTTCTTG
CGCGCGACCT ACTTCCGCTT TGCCAAGACC GTCCCGAAAT TGTTGCCGGA GCTGATGGAC
GCGCCGCAGG TGCTGGCGGT CGGCGATCTG CATCTGGAGA ATTTCGGCAC CTGGCGCGAC
GCCGAGGGGC GCCTGGTGTG GGGCGTCAAC GATTTCGACG AGGCCGCGGT GATGCCGTAT
CCGTTGGATC TGGTGCGGCT CGCCACCAGC ATCCGGCTGG CGCCGCCGGG GCCGCTCGGC
AAGCAGGCCG CGGCCGACGC GGTGCTGAAG GGCTATCGCG CCGGCCTTGC CGAGCCGCGC
CCGGCGCTGC TCGACCAGAG CGATCTCTGG ATGCTGCGCT ACGCGCTCGG CGCCGACGGC
AAATCGAAAA AATTCTGGCA CGACGTCGCC GAATGGCCGA CCGCCGAGCC GCCGCACAAA
GTGATCCGCG CGCTGACCAA GAGCCTGCCC GAGGACGCCA AAGACATCCA GTTTCGCTGC
CGCAGCGCCG GCGGCGGCAG CCTGGGGCGG CCGCGCTATG TGGCGATCGC GCAATGGCGC
GGCGGCACCG TGTTGCGCGA GGCCAAGGCG CTGGTGCCCT CGGCCTGGGT CTGGGCGCAC
GGCGGCAAGG CGGCGCATCT GCTCGATCTT GCGACCGCCG ACTATCGCGC GCCCGATCCG
TTTCTCGACA CCCGCGCGCA TTGCATCATC CGGCGGCTGG CGCCGGATTC CCGCAAGATC
GAGCTCGGCG ACAAAGCCGG CTCCGCGGTG AACGCCAATC TGATGTGGAC GATGGGCTAC
GATCTCGGCG CGATCCACGC CGCCGGCGAG CCCGGCGCGG ACAAGCTGCT GGACGATCTG
AACCAGCGCC GGCGCGGCTG GCTCAACGCC GCGGCCAAGC TGGCCGCCGC CGCGGTCACG
CGCGATTATC GGCAATGGGC GGGGTGA
 
Protein sequence
MSFRKHNAAY EAWLGRQCDV VARDVAKKHK RMKKSAFLFL RATYFRFAKT VPKLLPELMD 
APQVLAVGDL HLENFGTWRD AEGRLVWGVN DFDEAAVMPY PLDLVRLATS IRLAPPGPLG
KQAAADAVLK GYRAGLAEPR PALLDQSDLW MLRYALGADG KSKKFWHDVA EWPTAEPPHK
VIRALTKSLP EDAKDIQFRC RSAGGGSLGR PRYVAIAQWR GGTVLREAKA LVPSAWVWAH
GGKAAHLLDL ATADYRAPDP FLDTRAHCII RRLAPDSRKI ELGDKAGSAV NANLMWTMGY
DLGAIHAAGE PGADKLLDDL NQRRRGWLNA AAKLAAAAVT RDYRQWAG