Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2368 |
Symbol | |
ID | 3971540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2567775 |
End bp | 2568914 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925475 |
Product | hypothetical protein |
Protein accession | YP_532240 |
Protein GI | 90423870 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.305787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CCTCGCTGAA ATCCGGGCGC TGGCGCCGGA TCCGCGCGCT GATCGTCAAG GAGACGCTGC AGGTGGTGCG CGATCCGTCC AGCATCGTGG TCGCCTTCGT ACTGCCGGCG CTACTGTTGT TTCTGTTCGG CTTCGGCATC ACCTTCGACG CCACGCGCGT GAAGGTCGGC CTGGTGATCG AGGAGCCGAC GCCGGAAAGC GCCGAATTCG CGATGTCGCT GTCCAACACC CGCTACTTCG ACGTCCGTCA GGCGCAGAGC CGGCTCGCCT TCATCGACGA CCTCGCCGCC GGCAAGATCA GCGGCGTGAT CGTGTTGTCC GGCGATTTCG CCGAACGGTT GGAGCGCGGC GACACCGCCG GCGTCCAGGT CATCACCGAC GGCAGCGACC CCAACACCGC CGGCCTCGTC ACCGGCTATG TGCAAGGCGC CTGGCAGAGC TGGCAGAACC AGCGCGGCTT TGCCAAGACC ACGTCGATGC CGGGCCAGAT CGACGTCCAA GCGCGGTTCT GGTTCAACCC GGAGCTGGAG AGTCGCCGGC TGTTGGTGCC CGGCTCGATA TCGCTGATCA TGATGATGAT CGGCGCGCTG CTCACCGCGC TGGTGGTTTC GCGGGAATGG GAGCGCGGCA CCATCGAGGC GCTGCTGGCA ACCCCGATCG GGACGCTGGA ATTCCTGATC GGCAAGCTGG TGCCGAATTT CATGCTCGGG CTGTGCGCGA TGGCGGTCTG CGTGCTGGCA GCGCTGTTCG TGTTCGACAT TCCGCTGCGC GGCTCGCTCT TGATCCTGAT CGGCTTCACC GCGGTGTTCA TGAGCGTCGC GCTCAGCATC GGGCTGTTGA TCTCCACGGT GGCGAAGACC CAGTTCGTCG CCAGCCAAAT GGCGATGCTG GTGGCGTTCC TGCCCGGCTT GTATTTCTCC GGCTTCCTGT TCGAGATCGC CAGCATGCCG GCGCCGCTGC GGGCGTTCTC GGTGATCGTG CCGGCGAAAT ACTATGTGCA GGGGCTGCAG ACCATCTTCC TCGCCGGCAA CATCGCCTCG GTGCTGGTGC CCTGCACGCT GATCCTCGTC TTCATGAGCA CGGTGCTGTT CGCGCTGACC GCGCGCAACA CCCGGCAACG GCTGGATTGA
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Protein sequence | MSAASLKSGR WRRIRALIVK ETLQVVRDPS SIVVAFVLPA LLLFLFGFGI TFDATRVKVG LVIEEPTPES AEFAMSLSNT RYFDVRQAQS RLAFIDDLAA GKISGVIVLS GDFAERLERG DTAGVQVITD GSDPNTAGLV TGYVQGAWQS WQNQRGFAKT TSMPGQIDVQ ARFWFNPELE SRRLLVPGSI SLIMMMIGAL LTALVVSREW ERGTIEALLA TPIGTLEFLI GKLVPNFMLG LCAMAVCVLA ALFVFDIPLR GSLLILIGFT AVFMSVALSI GLLISTVAKT QFVASQMAML VAFLPGLYFS GFLFEIASMP APLRAFSVIV PAKYYVQGLQ TIFLAGNIAS VLVPCTLILV FMSTVLFALT ARNTRQRLD
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