Gene RPC_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2368 
Symbol 
ID3971540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2567775 
End bp2568914 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID637925475 
Producthypothetical protein 
Protein accessionYP_532240 
Protein GI90423870 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.305787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCTCGCTGAA ATCCGGGCGC TGGCGCCGGA TCCGCGCGCT GATCGTCAAG 
GAGACGCTGC AGGTGGTGCG CGATCCGTCC AGCATCGTGG TCGCCTTCGT ACTGCCGGCG
CTACTGTTGT TTCTGTTCGG CTTCGGCATC ACCTTCGACG CCACGCGCGT GAAGGTCGGC
CTGGTGATCG AGGAGCCGAC GCCGGAAAGC GCCGAATTCG CGATGTCGCT GTCCAACACC
CGCTACTTCG ACGTCCGTCA GGCGCAGAGC CGGCTCGCCT TCATCGACGA CCTCGCCGCC
GGCAAGATCA GCGGCGTGAT CGTGTTGTCC GGCGATTTCG CCGAACGGTT GGAGCGCGGC
GACACCGCCG GCGTCCAGGT CATCACCGAC GGCAGCGACC CCAACACCGC CGGCCTCGTC
ACCGGCTATG TGCAAGGCGC CTGGCAGAGC TGGCAGAACC AGCGCGGCTT TGCCAAGACC
ACGTCGATGC CGGGCCAGAT CGACGTCCAA GCGCGGTTCT GGTTCAACCC GGAGCTGGAG
AGTCGCCGGC TGTTGGTGCC CGGCTCGATA TCGCTGATCA TGATGATGAT CGGCGCGCTG
CTCACCGCGC TGGTGGTTTC GCGGGAATGG GAGCGCGGCA CCATCGAGGC GCTGCTGGCA
ACCCCGATCG GGACGCTGGA ATTCCTGATC GGCAAGCTGG TGCCGAATTT CATGCTCGGG
CTGTGCGCGA TGGCGGTCTG CGTGCTGGCA GCGCTGTTCG TGTTCGACAT TCCGCTGCGC
GGCTCGCTCT TGATCCTGAT CGGCTTCACC GCGGTGTTCA TGAGCGTCGC GCTCAGCATC
GGGCTGTTGA TCTCCACGGT GGCGAAGACC CAGTTCGTCG CCAGCCAAAT GGCGATGCTG
GTGGCGTTCC TGCCCGGCTT GTATTTCTCC GGCTTCCTGT TCGAGATCGC CAGCATGCCG
GCGCCGCTGC GGGCGTTCTC GGTGATCGTG CCGGCGAAAT ACTATGTGCA GGGGCTGCAG
ACCATCTTCC TCGCCGGCAA CATCGCCTCG GTGCTGGTGC CCTGCACGCT GATCCTCGTC
TTCATGAGCA CGGTGCTGTT CGCGCTGACC GCGCGCAACA CCCGGCAACG GCTGGATTGA
 
Protein sequence
MSAASLKSGR WRRIRALIVK ETLQVVRDPS SIVVAFVLPA LLLFLFGFGI TFDATRVKVG 
LVIEEPTPES AEFAMSLSNT RYFDVRQAQS RLAFIDDLAA GKISGVIVLS GDFAERLERG
DTAGVQVITD GSDPNTAGLV TGYVQGAWQS WQNQRGFAKT TSMPGQIDVQ ARFWFNPELE
SRRLLVPGSI SLIMMMIGAL LTALVVSREW ERGTIEALLA TPIGTLEFLI GKLVPNFMLG
LCAMAVCVLA ALFVFDIPLR GSLLILIGFT AVFMSVALSI GLLISTVAKT QFVASQMAML
VAFLPGLYFS GFLFEIASMP APLRAFSVIV PAKYYVQGLQ TIFLAGNIAS VLVPCTLILV
FMSTVLFALT ARNTRQRLD