Gene RPC_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2367 
Symbol 
ID3971539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2566655 
End bp2567767 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content63% 
IMG OID637925474 
Producthypothetical protein 
Protein accessionYP_532239 
Protein GI90423869 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGA CCAGGCTGCT CGCGCTGATC GTCAAGGAGA TGCTGGCGGC GTTCCGCGAT 
CCGAAGGCGC GGATGGCGCT GGTGCTGCCG CCGCTGATCC AATTCTTCCT GTTCGCCTTC
GCCGCCACTT TGGAGGTCTC TAACGTGCCG GTCGGCGTGT TGAACCAGGA TTGGGGCGCG
CAGTCCGAAC AATTGATTAG CCGCTTCGAG CGCGCCTCGG CGTTTTCCGA AGTGCGGCGC
TACGGCAGCG AGGCCGAGGC ACGCGCCGCG ATCGACCGCC AGGACGTCAT GGTGGTGATC
CAGATCGGCC AGGATTTTTC CCGCAAGCTC GCCGGCAACG AAAAGCCGAC GGTGCAGCTG
TTGCTCGACG GCCGCAAATC CAACAGCGCG CAGATCTTGA GTAACTATCT CAACACCATC
ATCGCGCAAT ACAGCGCCGC CTATCGGATG GGCGGCGCGG CCGTGCCGCC GGAAAGCGAG
ATCGTCGACC GCAGCTGGTA CAATCCCAAT CGCGGCTATC GCGAATCCAT GGTGCCGGTG
CTGATCGCCA CGCTGCCGAT GACCATGGTG CTGATGATCG TCGGCATGTC GGTGGCGCGC
GAGCGCGAAC TCGGCACCTT CGAGCAACTC CTGGTGTCGC CGCTGCAGCC GTTGGAGATC
GTGGTCGGCA AGGCCGTTCC CGGGCTGATC GTCGGCTTCG CGCAATGCAC CATCATCACC
TTGATCGTGA TCTTCGGCTT CGGCATCAGC TTGACCGGGT CGGCGCTGGT GCTGTTCACC
GGGCTTGCGA TCTTCCTGGT CTCGATCATC GGCATCGCGC TGTTCATCTC CTCGCTGGTG
TCGAACCAGC AGCAGGCGAT GATGGGCATC ATGGTGACGA TGATGCCGCT GATGATGCTG
TCGGGATTCA GCTCGCCGGT GCAGAACATG CCGGACTGGC TACAGCCGGT CGCGCAGATC
AACCCGCTGA CGCATATCGT GGTGGTGATC CGCGGCGTGT TCCTGCGCGA CATGGCGTTC
GGCGCGGTCG CGGAGCGGCT GTGGCCAATG GCCGCAATCG CGGTGGTGAC GATCTCGGCT
GCCGCCTGGA TGTTCCGCCG CAAGATCCAG TGA
 
Protein sequence
MIWTRLLALI VKEMLAAFRD PKARMALVLP PLIQFFLFAF AATLEVSNVP VGVLNQDWGA 
QSEQLISRFE RASAFSEVRR YGSEAEARAA IDRQDVMVVI QIGQDFSRKL AGNEKPTVQL
LLDGRKSNSA QILSNYLNTI IAQYSAAYRM GGAAVPPESE IVDRSWYNPN RGYRESMVPV
LIATLPMTMV LMIVGMSVAR ERELGTFEQL LVSPLQPLEI VVGKAVPGLI VGFAQCTIIT
LIVIFGFGIS LTGSALVLFT GLAIFLVSII GIALFISSLV SNQQQAMMGI MVTMMPLMML
SGFSSPVQNM PDWLQPVAQI NPLTHIVVVI RGVFLRDMAF GAVAERLWPM AAIAVVTISA
AAWMFRRKIQ