| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2343 |
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| Symbol | |
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| ID | 3972184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2548482 |
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| End bp | 2549450 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925450 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_532215 |
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| Protein GI | 90423845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.714598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.132345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAG CGACAGGATT GCTGGTTGCT GGTGTAGTTT CGGTCGGCGT GGCGGTGACC
GCCTTCGCGC AGAGCCCACC GCGTTCTGCC AAAGCCCCGC AAGCCATCGC CGCCGCCCCG
CAGGCCGCGG CCCCCGCCGC TGCCGCTGCG GCCCCGCTGC CGCCGCCTGC CCCGGCCAAA
GCGGCCTGCG CCAATCCCGA CGCGCTCGGC GTCGGCCGCG TCGTCGAGAT CGACACCACC
GGCGGCCCCG GCTTCGGCTT CGAGCACTTC AAGCAGCTGG ATTTCCTGCG CGACAAGGAA
GTGGTGCTGA CCTTCGACGA CGGCCCCTGG CCGGTCAACA CGCCATCGGT GTTGAAGACC
CTGGCCGACG AATGCACCAA GGCGATCTTC TTTCCGATCG GCAAGCACGC CACCTACCAT
CCGGAAATCC TCAAGGCGGT GGCCGCCGCC GGCCACAGCA TCGGGTCGCA TACCTGGTCG
CACGCCAATC TCAACAACAA GAAGCTGACC GAGCAGCAAC AGAAAGACGA GATCGAGAAG
GGCTTTTCCG CAGTGAAATG GGCGCTCGGC AGCGCGCCCT CGCCATTCTT CCGCTTCCCG
GCGCTGCAGC ATCCGCCGGC CATGGTGACC TATCTCGGCA CCCGCAACGT CGCGATGTTC
TCCTGCGATC TCGACTCCTT CGACTTCAAG GCCGGCAAGC CGGAGAAGAT CGTCGAGACG
GTGATGAGCA AGGTCGACAA GCTCGGCAAG GGCATCATCC TGATGCACGA TTTCCAGAAG
CACACCGCCG AAGCGCTGCC GACGCTGTTG CGCCGCCTGA AGGCCGGCGG CTACAAGGTG
GTGCAGATGA AGGCCAAGGC GCCGGTCGCG ACCATTGCGG AGTATGACGA GGCGCTCGCC
AAGGAAACCA AGCTGCCGAC GGTGAGTTCG CGCCCGCTGA ACAGCGTGGT GCAGACGATT
TCCGAATAG
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| Protein sequence | MRIATGLLVA GVVSVGVAVT AFAQSPPRSA KAPQAIAAAP QAAAPAAAAA APLPPPAPAK
AACANPDALG VGRVVEIDTT GGPGFGFEHF KQLDFLRDKE VVLTFDDGPW PVNTPSVLKT
LADECTKAIF FPIGKHATYH PEILKAVAAA GHSIGSHTWS HANLNNKKLT EQQQKDEIEK
GFSAVKWALG SAPSPFFRFP ALQHPPAMVT YLGTRNVAMF SCDLDSFDFK AGKPEKIVET
VMSKVDKLGK GIILMHDFQK HTAEALPTLL RRLKAGGYKV VQMKAKAPVA TIAEYDEALA
KETKLPTVSS RPLNSVVQTI SE
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