| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2309 |
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| Symbol | pdxA |
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| ID | 3973267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2508984 |
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| End bp | 2510003 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637925417 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_532182 |
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| Protein GI | 90423812 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.052492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG TGTCGAACAA GCCGCTGGCG CTCACCCTCG GCGAGCCGGC CGGCATCGGT
CCGGACGTAG CGCTCGCGGC CTGGCTCGGG CGCGGCACGT CGCCGATCCC GGCCTTCTAT
CTGCTCGGTG ATCGGGCGTT TCTACAGGCC CGCGCCGCCA CGCTCGGCCT CAACGTGCCG
TTCGCAGAAG TGCGGCCCGA TCAGGCCGCC GCGACATTTG CCGATGCCCT GCCGGTGGTC
GGAACCGGCC ACCCCGTCAC CGCCATGCCC GGTCGGCCGG ACGGCAGCAG CGCGGCTGCG
GCGATCGGCG CGATCCGCCA GGCGGTGCAG GACGTGATCG CCGGACGCGC CGCGGCGGTG
GTGACCAATC CGATCGCCAA GAGCGTGTTG TACCAGGCCG GCTTCAAACA TCCCGGCCAT
ACCGAATTTC TCGCCGAACT GGCGCGGGGC GAAGGCGCGC CACCGCAACC GGTGATGATG
CTGTGGTCGG AGGCGCTCGC CGTGGTGCCG GTGACGATCC ACCTGCCGCT GCGCGACGCC
ATCGCGCAGC TCACCACCGG ACTGATCGTG TCGACGGCGC GGATCGTCGC GAGCGCCTTG
CGGCGCCACA TGCGGATCGC CGCGCCGCGG CTGGCGGTCT CCGGACTCAA CCCGCACGCC
GGCGAAGACG GCGGCCTCGG CCGCGAGGAC CAGAGCATCA TTGCGCCCGC GGTCGAGATC
CTGCGCCGCG ACGGCATCGA CGCCCGCGGC CCGCTCCCCG CCGACACCAT GTTCCATGAA
GCGGCACGCA AGACCTACGA CTGCGCGCTG TGCATGTATC ACGACCAGGC GCTGATCCCG
GTGAAGACGC TGGCGTTCGA TCGCGCCGTC AACGTCACGC TGGGGTTGCC GTTCGTGCGC
ACCTCGCCGG ATCACGGCAC CGCCTTCGAC ATCGCCGGCA GCGGCCGCGC CGATCCGTCC
AGCCTGATCG AAGCGCTGCG GCTGGCGGCG CGGATGGCCA CGCCGACGAC GCCGGCATGA
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| Protein sequence | MTAVSNKPLA LTLGEPAGIG PDVALAAWLG RGTSPIPAFY LLGDRAFLQA RAATLGLNVP
FAEVRPDQAA ATFADALPVV GTGHPVTAMP GRPDGSSAAA AIGAIRQAVQ DVIAGRAAAV
VTNPIAKSVL YQAGFKHPGH TEFLAELARG EGAPPQPVMM LWSEALAVVP VTIHLPLRDA
IAQLTTGLIV STARIVASAL RRHMRIAAPR LAVSGLNPHA GEDGGLGRED QSIIAPAVEI
LRRDGIDARG PLPADTMFHE AARKTYDCAL CMYHDQALIP VKTLAFDRAV NVTLGLPFVR
TSPDHGTAFD IAGSGRADPS SLIEALRLAA RMATPTTPA
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