| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2290 |
|---|
| Symbol | |
|---|
| ID | 3973731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2489532 |
|---|
| End bp | 2491028 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637925398 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_532163 |
|---|
| Protein GI | 90423793 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.308147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAA CCGATTCGAA CGTTCTCAAA CTCGCGCCGG AACCGGGCAC CCCGGCCTAC
CGCATGGCGC CGCATAATAT CGAGGCGGAA CAGAGCGTCC TCGGCGCCAT CCTGATCAAC
AACGACGCGT TCTACCGGGT CTCGGATTTC CTCAAGCTGG AACACTTCTT TGAGCCGATC
CACCAGACCA TCTACGACAC CGCCGCCAGC CTGATTCGCG CCGGCAAGGT CGCCACCCCG
GTGACGCTGA AGACGTTTCT CCCCGCCGAC ACCGACCTCG GCGGCATCAC CGTGGGGCAA
TATCTGGCGC GGCTCGCCGC CGAAGCCACC ACCATCATCA ACGCCCATGA TTACGGCCGC
ACCATCTACG AACTGGCGCT GCGCCGCGAC CTGATCGGCA TCGGCACCGA CATGGTCAAC
GTCGCCTATG ACGCGCCGGT GGATTTCGCC CCGAAGGCGC AGATCGAGGA CGCCGAGCGG
CGGCTGTACG AGCTTGCGGA ATCCGGCCGC TATGACGGCG GCTTCCAGAA ATTCTCCCAG
GCGCTGACCA CCGCGGTCGA CATGGCGGCG GCGGCGTTCC AGCGCGACGG CCGCTTGTCC
GGCATCGCCA CCGGGCTGCG CGACCTCGAT AACAAGATGG GCGGCTTGCA GCACTCCGAC
TTGATCATCG TCGCCGGCCG CCCCGGCATG GGCAAGACCG CGCTCGCCAC CAACATCGCC
TACAACGTCG CCCGCGCCTA TCGCGGCGAG ATCCAGGCCG ACGGCACCAA CAAGACCGTC
AATGGCGGCA TCGTCGGGTT CTTCTCCTGC GAAATGTCGG CCGAACAGCT CGCCACCCGT
ATTCTCGCCG AGCAGACCGG GATTTCATCG AGCATGATCC GCCGCGGCGG CATCAGCGAG
GCGGATTTCG ACAAGATCCG CGATTACTCG ATCGAATTGC AGTCGCTGCC GCTGTTCGTC
GACGAGACCG GCGGCCTGTC GATCTCGCAG CTCACCGCGC GGGCGCGGCG CTTGAAGCGG
CAGAAGGGCC TCGACCTGAT CATCGTCGAC TATATCCAGC TGTTGCAGGG CAGCGGCAAA
CGCTCCGACA ACCGCGTCCA GGAAGTCACC GAGATCACCA CCAGCCTGAA GGCTTTGGCG
AAAGAACTCA ACGTCCCGGT GATCGGGCTG TCGCAGCTGT CGCGTCAGGT CGAAAGCCGC
GACGACAAGC GGCCGCAATT GTCCGACTTG CGCGAATCCG GCTCGATCGA GCAGGACGCC
GACGTGGTGA TGTTCGTGTA TCGCGAAGAA TACTATCTGC AGAACAAGGA GCCGCGCCCC
GGCACGCCGG AGCACGAAAA ATGGACCACC GACATGGATC TGGTGCACGG CAAGGCCGAA
GTCATCATCG GCAAGCAGCG CCACGGCCCC ACCGGCACCG TCGACTTGCA GTTCGAGGGC
CAGTTCACCA GGTTCAGCGA TCTGGTGCAG GACAGTCACC TGCCCGACCG CATGTGA
|
|---|
| Protein sequence | MAATDSNVLK LAPEPGTPAY RMAPHNIEAE QSVLGAILIN NDAFYRVSDF LKLEHFFEPI
HQTIYDTAAS LIRAGKVATP VTLKTFLPAD TDLGGITVGQ YLARLAAEAT TIINAHDYGR
TIYELALRRD LIGIGTDMVN VAYDAPVDFA PKAQIEDAER RLYELAESGR YDGGFQKFSQ
ALTTAVDMAA AAFQRDGRLS GIATGLRDLD NKMGGLQHSD LIIVAGRPGM GKTALATNIA
YNVARAYRGE IQADGTNKTV NGGIVGFFSC EMSAEQLATR ILAEQTGISS SMIRRGGISE
ADFDKIRDYS IELQSLPLFV DETGGLSISQ LTARARRLKR QKGLDLIIVD YIQLLQGSGK
RSDNRVQEVT EITTSLKALA KELNVPVIGL SQLSRQVESR DDKRPQLSDL RESGSIEQDA
DVVMFVYREE YYLQNKEPRP GTPEHEKWTT DMDLVHGKAE VIIGKQRHGP TGTVDLQFEG
QFTRFSDLVQ DSHLPDRM
|
|---|
| |