Gene RPC_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2268 
Symbol 
ID3973112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2469008 
End bp2469418 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID637925376 
ProductPilT protein-like 
Protein accessionYP_532141 
Protein GI90423771 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.375245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.653218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGC TGCTGGACAC CTGTGCTCTT ATTTTTCTGA CGGCGAACGT GGCGGAGGCT 
GGCAAAGCCA CGGCAGCGTT GCAGCGCGCC TACGAGACCG ACGAAATGGT TTTCGTCTCC
CCGATTTCGG CCTGGGAGAT CGGTCTTTTG GTGTCGCTTG GCCGGCTCAA TCTTTCGATA
GCGCCAAAGC GATGGTTCGA CAGCGTCCTG CAAAAGCCCG GCATCGCTTT GGCCGAATTG
TCGTCGGACG TCCTGATCTC ATCATCGTTC CTTCCGGATT TGCCGTTGCG CGATCCTGCC
GACCGCATCA TTGTCGCCAC CGCCCGCGAA TACGGTTTCA CTTTATTGAC GCGGGATAAG
CAGCTATTGG CGTATTCCGA TCGAGGGCAT ATTCGCGCTT TGGCCTGCTG A
 
Protein sequence
MALLLDTCAL IFLTANVAEA GKATAALQRA YETDEMVFVS PISAWEIGLL VSLGRLNLSI 
APKRWFDSVL QKPGIALAEL SSDVLISSSF LPDLPLRDPA DRIIVATARE YGFTLLTRDK
QLLAYSDRGH IRALAC