Gene RPC_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2265 
Symbol 
ID3973109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2465849 
End bp2466946 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID637925373 
Productsignal transduction histidine kinase 
Protein accessionYP_532138 
Protein GI90423768 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.887672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.277402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG ACGAGGGACT GCCAGCTTCC GAACAGGTCG ATCAGATTCT GGGCTCGTCG 
AAGCTCGTCT CGGCGATCGA GAACGACAAA TACAAGCATC TGCTGGACGC CGTCCCGGTG
GCGGTCGCGG TGTCGCGCGG CACCGGCGAC GAGCAGAGCA TGGTCTACGC CAACCGGGCC
TTCGAGCAGC TGCTGTCGCT GCCGCCGTCC GAGGTCGAGG GCCAACGCTG GGTGTTTCTC
GACGGCTTTC GCGACGAAGA CAACCCCTCG CGCACGCTGG GCGAGGCGAT CCGCGACAGC
GAGGATTTCA TCGGAGTGTT TCGCCCGGTG GCGCCGGCCG ACCGCTTGGT GATCGTGCAG
GCCTATGCCT CGGTGATCGA GAGCGACGAC GGCGTGGAGA ATTTCCGCAT CGCAGCTCTG
GTCGATGTCG CCGGCCGCGA GCGGGCGCAG ATCGAGCAGT TCGAAAACCA GATTCGCGAT
CGCGACATGC TGATGCGCGA ATTGCAGCAC CGGGTGAAGA ACAATCTGCA GCTGATCACC
GCGCTGGTGC GCCTTGAGGC GCGCTCGGCG GCGGAAGGGG AATCGGTGGC GCTGGCGCGG
TTGGCGAGCC GGATCGATGC TCTGACCGTG CTATACCGCA TCCTGTCGGC GGAAAACGCC
GTCGGCGATA TCGATCTTGG CCAGTATCTG GCGGACGTCG CCGACGCGGT GATGCAGGCG
AACGCCATGC CGTCGATCGA AATCAACGTG CAGGCCAGTT ATTGCCCGCT GTCGATCAAC
ATCGCGATGC CGGCCGGATT GCTTGTCAAC GAGATGCTGA CCAACGCGCT GAAATATGCT
TTCGTCGGGC GCAGCAGCGG CAAGATCAAG CTGATCTGCA GCTCGGACGC CGGCCGCGTC
ACCGTGATCG TCTCCGACGA CGGCGTCGGG CTCGGCGACA ATGTGGAATG GCCGTCGCCG
CGCAAGCTCG GCGCCCTGAT CCTGCAGACG CTGAAGGAGA ACGCCAAGAA CGTCACGTTC
CGCGCTGAGA GCATTCGCGG CCAGGGGACG TTCTTCACTT TCGGTTTCGA CCTCGTCGCG
GCGCCGGCCC CGAATTGA
 
Protein sequence
MSADEGLPAS EQVDQILGSS KLVSAIENDK YKHLLDAVPV AVAVSRGTGD EQSMVYANRA 
FEQLLSLPPS EVEGQRWVFL DGFRDEDNPS RTLGEAIRDS EDFIGVFRPV APADRLVIVQ
AYASVIESDD GVENFRIAAL VDVAGRERAQ IEQFENQIRD RDMLMRELQH RVKNNLQLIT
ALVRLEARSA AEGESVALAR LASRIDALTV LYRILSAENA VGDIDLGQYL ADVADAVMQA
NAMPSIEINV QASYCPLSIN IAMPAGLLVN EMLTNALKYA FVGRSSGKIK LICSSDAGRV
TVIVSDDGVG LGDNVEWPSP RKLGALILQT LKENAKNVTF RAESIRGQGT FFTFGFDLVA
APAPN