Gene RPC_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2256 
Symbol 
ID3973100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2458714 
End bp2460693 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content62% 
IMG OID637925364 
Productmyosin-cross-reactive antigen 
Protein accessionYP_532129 
Protein GI90423759 
COG category[S] Function unknown 
COG ID[COG4716] Myosin-crossreactive antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.465061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCACCTCTAG GCCGATCCCG TCGGTTCCCG GCACGCCCCC GATTGAGGCC 
GACGCTGGCG CCGCCTTCTG GCGCAAAGGG CCGAACGACA CGCTGCCACC GCCCGACATG
GTCGGTCCCT ACATGCGCAA CCGTCCGGTT CCGTTGGAGC CGGTGGATGG GCGCAAGGCC
TGGATCATCG GCAGCGGCAT CGCTGGGCTG TCCGCCGCGT TCTACTTGAT GCGCGACGGC
GGCATGAAAG GCGAGGACAT CACCATCCTC GATACGATGA CGATCGCCGG CGGCTCGCTC
GACGGCGCCG GCAATGCCGA CCAAGGCTAC ATCATTCGCG GCGGCCGCGA GATGAATTTC
AACTACGACA ATTTCTGGGA CGTGTTTCAG GACGTGCCGG CGCTGGAATT GCCCAATGGC
TTTAGCGTTC TCGACGAATA CCGGCTGGTG AACGACAACG ATCCAAACTG GTCGAAGGCG
CGGCTGATGC ACAAGCAGGG CCAGATCCGC GACTTCTCGA CGCTGGGCCT GAGCAAGCTG
CACCAGTGGG AAATCGTCAA ACTGCTGCTC AAGCGCAAGG AAGAGCTCGA CGACATCACC
ATCGAGCAAT ATTTCAGCGA GAGCTTTCTC GAAACGAACT TCTGGTATCT GTGGCGCTCG
ATGTTCGCCT TCGAGAATTG GCAGAGCCTT CTGGAGATGA AGCTCTACAT GCATCGCTTC
CTCGATGCGA TCGACGGGCT GACCGACATG TCGGCCTTGG TGTTCCCGAA ATACAATCAG
TACGATAGTT TCGTGGTGCC GCTGACGCGG CTTCTCAAGG AGAAGGGCGT CAAGGTGCAG
TTCGGCACAA GGGCCTATGA CCTCGCCATG GTCGAGGAGG GCGGCCGTCG CACCGTGACC
GCGATCCGCT GCAAGAAGGA CGGCAAGGAC GACAGCATCG CCATAGGTCC GAAGGATGTG
GTGTTCGCAC TGACCGGCTC GATGACCGAA GGCACCGCTT ACGGCGACAT GGACACCGCC
CCGGTGCTGG CCCGCGGCAA CGCCGAGCCC GGCGAGGACA GCGACTGGGT GCTTTGGAAG
AACCTGGCGA AGACCTCGCC GGTGTTCGGC AAGCCGGAAA AATTCTACGG CAATGTGGCC
GGCTCGATGT GGGAATCGGC GACGCTGACC TGCAGGCCGT CGCCCTTGGT CGACAAGCTG
AAGGAATTGT CGGTCAACGA TCCGTTCTCC GGCAAGACGG TGACCGGCGG AATCATCACC
TTCACCGATT CCAACTGGGT GCTGAGCTTC ACCTGCAACC GCCAACCGCA TTTCCCGACC
CAGCCCAACG ACGTGCTGGT GCTGTGGGTC TATGCGCTGC TGATGGACAA GGACGGCAAC
TACGTCAAAA AGCCGATGCC GGCTTGCACC GGCCGGGAAA TTCTGGCGGA GCTCTGCTAT
CATCTCGGCA TCGTCGACCA GCTCGATGCG GTTGCCGCCA AGACCAAGGT TCGGCTGGCG
CTGATGCCCT ACATCACCGC GCAATTCATG CCGCGGGCTG CCGGCGACCG GCCCCGCGTC
GTCCCCGAGG GGTGCACCAA CCTGGCTTTG CTGGGGCAAT TCGTGGAGAC CAGCAACGAC
ATCATCTTCA CCATGGAGGC CTCGGTGCGC ACCGCGCGGA TCGGTGTCTA CACGCTGCTC
GGCCTGCCCA AGCAGGTCGC CGATATCAGC CCGACGCAAT ACGACATCCG CAACCTGATG
AAGGGCGCGC GCGCGTTGAA CAACAACGAG CCGTTCCCCG GCGAGCGGTT GCTGCATCGG
CTGCTCGACA ACACCTATTA CGCCCACATT CTTCCGCCGT TGCCCGAGCA GGACGACACG
CTGCGAGAAC GGGCCGAAGC CGAATTGTCC ACTCTGCTCG GCAAAGGAAG TCAGGCGCTC
GGCGCGGTGT ATGGCTGGCT CGACCGATTG CGGGATGGCA GCAGCAACAC ATCGAAATAA
 
Protein sequence
MTESTSRPIP SVPGTPPIEA DAGAAFWRKG PNDTLPPPDM VGPYMRNRPV PLEPVDGRKA 
WIIGSGIAGL SAAFYLMRDG GMKGEDITIL DTMTIAGGSL DGAGNADQGY IIRGGREMNF
NYDNFWDVFQ DVPALELPNG FSVLDEYRLV NDNDPNWSKA RLMHKQGQIR DFSTLGLSKL
HQWEIVKLLL KRKEELDDIT IEQYFSESFL ETNFWYLWRS MFAFENWQSL LEMKLYMHRF
LDAIDGLTDM SALVFPKYNQ YDSFVVPLTR LLKEKGVKVQ FGTRAYDLAM VEEGGRRTVT
AIRCKKDGKD DSIAIGPKDV VFALTGSMTE GTAYGDMDTA PVLARGNAEP GEDSDWVLWK
NLAKTSPVFG KPEKFYGNVA GSMWESATLT CRPSPLVDKL KELSVNDPFS GKTVTGGIIT
FTDSNWVLSF TCNRQPHFPT QPNDVLVLWV YALLMDKDGN YVKKPMPACT GREILAELCY
HLGIVDQLDA VAAKTKVRLA LMPYITAQFM PRAAGDRPRV VPEGCTNLAL LGQFVETSND
IIFTMEASVR TARIGVYTLL GLPKQVADIS PTQYDIRNLM KGARALNNNE PFPGERLLHR
LLDNTYYAHI LPPLPEQDDT LRERAEAELS TLLGKGSQAL GAVYGWLDRL RDGSSNTSK