| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2248 |
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| Symbol | |
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| ID | 3973265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2452615 |
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| End bp | 2453394 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925356 |
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| Product | peptidase M15D, vanX D-ala-D-ala dipeptidase |
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| Protein accession | YP_532121 |
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| Protein GI | 90423751 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.392208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGGC GTGTCGTGAG CAAGTTTGCA GCGTTCGGAA TTGGGCTGTT GGCGCTGGCG
CTCGGGGTTC CGGCGGCCGC GCAGCCGCTG CCCGACGATT TGGTGTTTTT GCACGACGTC
GATCCCAGCA TTCAGCAGGA CATCCGCTAT GCCGGGGCGA ACAATTTCAT CGGCCGCAGG
CTCGACGGCT ATGACGGCGC CGAGTGCATC GTCAGGCGCC CGGTCGGGCT GGCGCTGCGC
GCGGTTCAGC GCGGCCTGCG CGGGCAAAAC CTGTCGCTGA AGATGCTGGA TTGCTTCCGT
CCGGGACGCG CCTCGCGGGA CATGGTGGCG TGGGCGCAGG ACGGCCGCGA GACCGCCGCG
GAGCGGCGCT ACAACCCGGG CTTCTCCAAG CGCGAACTGT TCCGGCTGGG CTACATCGCC
GAACGCTCCG GGCATTCCAC CGGCGCCGCG GTCGATCTGA CGCTGGTCGA CCTGCGGGCG
CCGCGCGGGC CGGCGTTCGA TCCCGGCAAA GCCTATGCCG ACTGTACCGC GCCGGAAGCG
TTGCGCGCGC CGGAGGCCTC CGTCGACATG GGCACCGGTT ATGATTGTTC CGACGCCAAG
GCGCACACCG CGGCGCGGTC GATCACGCCG GCGCAGCGCA AGTGGCGCGA GACCCTGAAT
GCGGCGATGC GCCGGCACGG CTTCGTCAAC TACGCCAAGG AATGGTGGCA TTTTTCGCAG
GCCGGGATGA GCGGTTTGCA GGCTTACGAT TTTCCGGTGC CGCAGTATCG CAAAGACTAG
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| Protein sequence | MERRVVSKFA AFGIGLLALA LGVPAAAQPL PDDLVFLHDV DPSIQQDIRY AGANNFIGRR
LDGYDGAECI VRRPVGLALR AVQRGLRGQN LSLKMLDCFR PGRASRDMVA WAQDGRETAA
ERRYNPGFSK RELFRLGYIA ERSGHSTGAA VDLTLVDLRA PRGPAFDPGK AYADCTAPEA
LRAPEASVDM GTGYDCSDAK AHTAARSITP AQRKWRETLN AAMRRHGFVN YAKEWWHFSQ
AGMSGLQAYD FPVPQYRKD
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