Gene RPC_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2236 
Symbol 
ID3973253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2439927 
End bp2440661 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID637925344 
ProductNUDIX hydrolase 
Protein accessionYP_532109 
Protein GI90423739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0182426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CGGCCAACGT CGACATCGAA GCCGAGCATC ATCCGTATTT CCGCCCGAAA 
GACGCAGCGA CGCTGCTGTT GATCGATCGC ACCGGGCGGG TCCCGAAAGT GCTGGTCGGC
CGCCGCCACG ACAATGTGGT GTTCATGCCG GGCAAATTCG TGTTTCCCGG CGGCCGGGTT
GACAAGACCG ATTGCCGCAT CCCGGTGGCG GCGCCGCTTC CCGCCGGACT CGAGGCCAAT
CTGCTGCAGG GCCGCCCGCT GATCAGCCGC GCCCGGGCCC GGGCGCTGGC GGTCTGCGCG
ATTCGCGAGG CCTGCGAGGA GACCGGGCTG TGCCTCGGCC GCAAAGTCCA TGGCGCCGCG
GCGCTCGACG GGCCGTGGGC GCCGTTCGCG CAGGCCGGGC TGCTGCCGGA CCCCTCCGGG
CTGTTCCTGG TCGCCCGCGC CATCACCCCG CCCGGCCGGG TGCGCCGGTT CGACACCCGT
TTCTTCACCG CCGACGCCTC GATGATCGCG CACCGCGTCG AGGGCGTGAT CCACCCGGGC
GCCGAGCTGG TCGAGCTGGT CTGGGTGGAA ATCGGTTCCG AACCGCTGGC CGGGCTGCAC
CAGATGACCC GGCAGGTGCT GGGCGAGCTG GAACGGCGGC TGGCCTCGGG GCCGCTGCGG
CACGACGCCC AGCTGCCGTT TTTCCATGTC GCACGCGGCC GGATGCAGAT GGATCTGTTG
AGCGGCACCG CCTGA
 
Protein sequence
MSDTANVDIE AEHHPYFRPK DAATLLLIDR TGRVPKVLVG RRHDNVVFMP GKFVFPGGRV 
DKTDCRIPVA APLPAGLEAN LLQGRPLISR ARARALAVCA IREACEETGL CLGRKVHGAA
ALDGPWAPFA QAGLLPDPSG LFLVARAITP PGRVRRFDTR FFTADASMIA HRVEGVIHPG
AELVELVWVE IGSEPLAGLH QMTRQVLGEL ERRLASGPLR HDAQLPFFHV ARGRMQMDLL
SGTA