Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2236 |
Symbol | |
ID | 3973253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2439927 |
End bp | 2440661 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637925344 |
Product | NUDIX hydrolase |
Protein accession | YP_532109 |
Protein GI | 90423739 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0182426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACA CGGCCAACGT CGACATCGAA GCCGAGCATC ATCCGTATTT CCGCCCGAAA GACGCAGCGA CGCTGCTGTT GATCGATCGC ACCGGGCGGG TCCCGAAAGT GCTGGTCGGC CGCCGCCACG ACAATGTGGT GTTCATGCCG GGCAAATTCG TGTTTCCCGG CGGCCGGGTT GACAAGACCG ATTGCCGCAT CCCGGTGGCG GCGCCGCTTC CCGCCGGACT CGAGGCCAAT CTGCTGCAGG GCCGCCCGCT GATCAGCCGC GCCCGGGCCC GGGCGCTGGC GGTCTGCGCG ATTCGCGAGG CCTGCGAGGA GACCGGGCTG TGCCTCGGCC GCAAAGTCCA TGGCGCCGCG GCGCTCGACG GGCCGTGGGC GCCGTTCGCG CAGGCCGGGC TGCTGCCGGA CCCCTCCGGG CTGTTCCTGG TCGCCCGCGC CATCACCCCG CCCGGCCGGG TGCGCCGGTT CGACACCCGT TTCTTCACCG CCGACGCCTC GATGATCGCG CACCGCGTCG AGGGCGTGAT CCACCCGGGC GCCGAGCTGG TCGAGCTGGT CTGGGTGGAA ATCGGTTCCG AACCGCTGGC CGGGCTGCAC CAGATGACCC GGCAGGTGCT GGGCGAGCTG GAACGGCGGC TGGCCTCGGG GCCGCTGCGG CACGACGCCC AGCTGCCGTT TTTCCATGTC GCACGCGGCC GGATGCAGAT GGATCTGTTG AGCGGCACCG CCTGA
|
Protein sequence | MSDTANVDIE AEHHPYFRPK DAATLLLIDR TGRVPKVLVG RRHDNVVFMP GKFVFPGGRV DKTDCRIPVA APLPAGLEAN LLQGRPLISR ARARALAVCA IREACEETGL CLGRKVHGAA ALDGPWAPFA QAGLLPDPSG LFLVARAITP PGRVRRFDTR FFTADASMIA HRVEGVIHPG AELVELVWVE IGSEPLAGLH QMTRQVLGEL ERRLASGPLR HDAQLPFFHV ARGRMQMDLL SGTA
|
| |