| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2207 |
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| Symbol | |
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| ID | 3972766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2407340 |
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| End bp | 2409547 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925315 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_532080 |
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| Protein GI | 90423710 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTT TCCTGCAGTC CCAGCTGGAT TTCATCTACT TCTTCTACGG CATGGTCTTC
ATCCTGCTCG GCGCCGCCTT TCTGGCGATT GCGCGCGCCG GGCTCGGGGG CACGGTCGGG
CTTTGGCCGT TCGGATTTTT TGCGCTGGTT CACGGTTTCG CCGAATGGTT CGACCTTGCT
GCCCTGATCC TCGGCGACAA TGCGCCGTTC CAGGCGGTGC GCCTGGCGCT GTTGACGACG
TCGTATCTGT TCTTGATCGA ATACGCCCGC AGGGGAGCCA TCGGTCTGGG CTTCAAACAG
CCGGACAGCT GGGTGTATTT TTCACTGGTT GGGCTGATTA TCGCGGCCGG GGTGCTCGGC
GGATTGCCCA CGGCGAATGT CGCGGCGCGC TACGGCCTGG GACTATGTGG CACCCTCGGC
GCAAGCCTGG TGGTGGCGTT ACGCGCCAGG CAGCATCCGC CGTTCAGTCG ACGTCTGCTC
ACGGCGTTTG CGGTGGTGCT GGCAATCTAT GGGGTGACGA GCGTTCTGAT GGTGGCGCCG
GCGCCGTTCT GGCCGGCCAG CGTCTACAAT TGGGAATGGT TCGTCGAGCT GACGGGAACG
CCCATTCAAC TGGTGCGCGG CGTGCTCGGC GGCGCACTGA CCGTGCTGTG TTGGGCGTTC
TGGGGACAAA TCCTGGTCGA GACGGTGGCG TCGGCGCGCT ACACGGCGTA TCTGCGCCGG
CAATTCGTCT GGACCATGAT CGTGCTGGTC TTGATCTTTG CCGGCGGGTG GGGGCTGACC
AGTTATCTTG GCGGCATCTA CCAACGGAAC GTCGAGTCGG AAGCACGGGG CGACAGCGAA
TTGCTGGTCA GCCGTCTGAC CGGGGAAGCC GCGGTGCTCG ACGCCATGGT GAAAGCGCTG
GCGAGGTCGC CGGTGCTGCT GCCGATGCTG AATGGTGGTG GCGGCGCGCA GGATCAACAC
ATCGACGAGG TGCTGCAGCG CGATGTCGAA GCCGCCGGAG CCCTGGTCGG CATGGTGCTC
AACCGATCCG GCACGGTGAT CGCTTCGTCC GATCGGCGCC AAGCGGCGAC GCTCGCTCTG
CCGAACGAAA GTGCGGCGCC GTATTTTCAG AGCGCGATCG CCGGGCTGGC CAGCAGTCAT
GTCGAGTTCG ATCCGGTTAG CGGGATGCGA AGCTACACCT CCAGTACGCC GATTCGCGAT
CGCGACGGCA GCGTCGTCGG TGTTGCGATG CTGAAGAAAT CGCTCGACCG GCTCGAAGCC
AGCCTGCTGT CGTTCGATGG GGAGTTCTAC TTCGTCAACG ACGACGGCGT GGTGATGCTG
TCCAATCGCG CCGAGATGTT GGGGCGCGCG CTGTGGCCGC GCGCGGTGGA CGAACTGCGG
CTGGCGAAGC CGAGTCCGGC GGCCAAGACC ATGATGTCGC GCGCGATCGT CGACTCGGTC
TGGACCACGG CCGACGGGGT CCCGGCCTAT GTGCTGCGAC ACACCGCCGA CGAAGGCGGC
TGGTCGTTGC TGATGGTGTT TCCAGTCACC GGAATCTTTC CGACCCGGTT TCTCGGCATC
GTCATCACGC TGCAATTCTC GATCATGGCG TTGTTCTACT TCTACGGCCG CGAGCACGGC
ATCCGCGACA GCATCCACAC CGAAAAACGC ATCGAGCTGC AGGAGCTGGC GCGCGGGCTG
CAAGTTCAAG CCACCACCGA TCCATTGACC GGGATGTTCA ACCGGCGGGT GTTCAACGAG
GGACTGGCCG CCGAACTCGT CCGCTTCAAT CGGCAGCAGA CGCCGTTCTC ATCGTTGTTG
TGCGACATCG ATCATTTCAA GGAGATCAAC GACGTGCATG GTCACCTGAT GGGCGATCAG
GTGCTGGTAC ATCTGTCGCG GATTTTGTCG CGCAGCGTCC GCCAGACCGA TTTCCTGGCG
CGCTGGGGCG GCGAAGAATT CGGCATCCTG CTGGTCGGGG CCGACCAGAC CGCGGCGGTC
GAGTTCGCCG AAAAGCTGCG AACCACCATC GCCTACACCG TGTTCGACGA TGTCGGCAAT
CTGACCTGCA GCTTCGGCGT CGCCGAATGC GTATTGGGCG ACACCCCGGA GAGCCTGCTC
GCCCGGGTCG ACAATGCGCT TTATCGGGCC AAGATGAACG GCCGCAACCG GGTCGAACTG
GCGCCGCCGC CGCTGACCGA GGCGCCGGCC TTGGCGCCCA CCGGCTGA
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| Protein sequence | MASFLQSQLD FIYFFYGMVF ILLGAAFLAI ARAGLGGTVG LWPFGFFALV HGFAEWFDLA
ALILGDNAPF QAVRLALLTT SYLFLIEYAR RGAIGLGFKQ PDSWVYFSLV GLIIAAGVLG
GLPTANVAAR YGLGLCGTLG ASLVVALRAR QHPPFSRRLL TAFAVVLAIY GVTSVLMVAP
APFWPASVYN WEWFVELTGT PIQLVRGVLG GALTVLCWAF WGQILVETVA SARYTAYLRR
QFVWTMIVLV LIFAGGWGLT SYLGGIYQRN VESEARGDSE LLVSRLTGEA AVLDAMVKAL
ARSPVLLPML NGGGGAQDQH IDEVLQRDVE AAGALVGMVL NRSGTVIASS DRRQAATLAL
PNESAAPYFQ SAIAGLASSH VEFDPVSGMR SYTSSTPIRD RDGSVVGVAM LKKSLDRLEA
SLLSFDGEFY FVNDDGVVML SNRAEMLGRA LWPRAVDELR LAKPSPAAKT MMSRAIVDSV
WTTADGVPAY VLRHTADEGG WSLLMVFPVT GIFPTRFLGI VITLQFSIMA LFYFYGREHG
IRDSIHTEKR IELQELARGL QVQATTDPLT GMFNRRVFNE GLAAELVRFN RQQTPFSSLL
CDIDHFKEIN DVHGHLMGDQ VLVHLSRILS RSVRQTDFLA RWGGEEFGIL LVGADQTAAV
EFAEKLRTTI AYTVFDDVGN LTCSFGVAEC VLGDTPESLL ARVDNALYRA KMNGRNRVEL
APPPLTEAPA LAPTG
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