Gene RPC_2199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2199 
Symbol 
ID3972758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2399641 
End bp2400336 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID637925307 
Productnitroreductase 
Protein accessionYP_532072 
Protein GI90423702 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.396094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA CTATCGCCGA CACCGCCCCG ATCGACGTGC TGGAATCCTT GCTGGCGCAG 
CGCTATTCGT GCCGCGCCTA CAAGACGGAC CAAGTGCCGC GCGAGATCAT CGAGCGGATT
CTCGGCGCCG CGCAGCGCAC CGCGTCGTGG TGCAACAGCC AGCCCTGGCA GGTGGTGATC
ACCTGCGGCG AGGAAACCGA GAAATTCCGC GACGCGCTGT ATCCGGTGGC GGCGTCCGGG
GCGGCGTCGA GCAGCGACTT TGAATTTCCG CGGGAATATC GCGGGGTCTA TCGGCAGCGC
CGCCGCGAGA GCGGCTTCCA GCTCTACAAC ACGATCGGCA TTCCGAGGGG CGACAGGCTG
GCCTACGCCC AACAGGCGCT GGAGAATTTC CGGTTGTTCG GCGCGCCGCA CGTCGCCATC
GTCACCACCG ACGAGGCGCT GGGCGTCTAT GGCGCGGTGG ATTGCGGCGG CTATGTCGGC
AATTTCATGC TGGCGGCGCA GGCGCTCGGC ATCGCCACCG TGCCGCAGGC CGCATTGGCG
TTTCACTCGG CGGTGGTGCG CCAGCATTTC GGGCTCGGCG AGGATCGCCG CGTGGTGTGC
GGCATCTCGT TTGGATTTGC CGACACCGCG CACAAGATCA ACTCCTACCG CACCAGCCGG
GCGCCGATCA GCGAGGTGGC GACCTTCGTG GGGTGA
 
Protein sequence
MTSTIADTAP IDVLESLLAQ RYSCRAYKTD QVPREIIERI LGAAQRTASW CNSQPWQVVI 
TCGEETEKFR DALYPVAASG AASSSDFEFP REYRGVYRQR RRESGFQLYN TIGIPRGDRL
AYAQQALENF RLFGAPHVAI VTTDEALGVY GAVDCGGYVG NFMLAAQALG IATVPQAALA
FHSAVVRQHF GLGEDRRVVC GISFGFADTA HKINSYRTSR APISEVATFV G