Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2171 |
Symbol | |
ID | 3971992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2364129 |
End bp | 2364839 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925279 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_532044 |
Protein GI | 90423674 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.436029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAATT TCGCTGGTTT CAAGCTCGCT GATAGGTCCC GCCGCTACCT TGCCTCGCTC GCGGTCTTGA CGATCGGCGT CGTGGCCTTT GCCGGCCCGG CGCAGGCTGC GCCGCTGCCG CTGTTCCCGT TCCTGCCGCT GCCGATGCTG CAGCAACCGA TGCCGCCGGC ACCGCAGGCC CAGATCGCGC CGCAGGACGA CGACGCCGTG GTTCGCAGCG AACTGCCGGC CCGGCTGAAA CGCCAGGTGG TGAACTACAC CACCCGCGAG GCGCAAGGCA CCATCGTGAT CGACACCGCC AACACCTATC TCTATCTGGT GCTCGGCAAT GGTCGGGCGA TGCGCTACGG CATCGGGGTC GGCCGCGACG GCTTCACCTG GTCCGGCGTG CAGCCGATCA CCAGGAAGGC CGAATGGCCG AACTGGACGC CGCCCGCCGA GATGATCGCG CGGCAGCCCT ATCTGCCGCG CTTCATGGCC GGCGGCCCCG GCAACCCGCT CGGCGCCCGC GCAATGTATC TCGGCGGCTC GATCTATCGC ATCCACGGAA CCAACGCGCC GGCGACCATC GGCACGCGGG TGTCCTCCGG CTGCATCCGG CTGACCAATG CGGACGTCGC CGATCTGTAT TCGCGGGTCA ATGTCGGCAC CAAGGTGGTG GTGCTGCCGA TCGATCGCCG CGCCGACAGC GCCGACCGCA GCCGCGGCTG A
|
Protein sequence | MINFAGFKLA DRSRRYLASL AVLTIGVVAF AGPAQAAPLP LFPFLPLPML QQPMPPAPQA QIAPQDDDAV VRSELPARLK RQVVNYTTRE AQGTIVIDTA NTYLYLVLGN GRAMRYGIGV GRDGFTWSGV QPITRKAEWP NWTPPAEMIA RQPYLPRFMA GGPGNPLGAR AMYLGGSIYR IHGTNAPATI GTRVSSGCIR LTNADVADLY SRVNVGTKVV VLPIDRRADS ADRSRG
|
| |