Gene RPC_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2171 
Symbol 
ID3971992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2364129 
End bp2364839 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID637925279 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_532044 
Protein GI90423674 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.436029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATT TCGCTGGTTT CAAGCTCGCT GATAGGTCCC GCCGCTACCT TGCCTCGCTC 
GCGGTCTTGA CGATCGGCGT CGTGGCCTTT GCCGGCCCGG CGCAGGCTGC GCCGCTGCCG
CTGTTCCCGT TCCTGCCGCT GCCGATGCTG CAGCAACCGA TGCCGCCGGC ACCGCAGGCC
CAGATCGCGC CGCAGGACGA CGACGCCGTG GTTCGCAGCG AACTGCCGGC CCGGCTGAAA
CGCCAGGTGG TGAACTACAC CACCCGCGAG GCGCAAGGCA CCATCGTGAT CGACACCGCC
AACACCTATC TCTATCTGGT GCTCGGCAAT GGTCGGGCGA TGCGCTACGG CATCGGGGTC
GGCCGCGACG GCTTCACCTG GTCCGGCGTG CAGCCGATCA CCAGGAAGGC CGAATGGCCG
AACTGGACGC CGCCCGCCGA GATGATCGCG CGGCAGCCCT ATCTGCCGCG CTTCATGGCC
GGCGGCCCCG GCAACCCGCT CGGCGCCCGC GCAATGTATC TCGGCGGCTC GATCTATCGC
ATCCACGGAA CCAACGCGCC GGCGACCATC GGCACGCGGG TGTCCTCCGG CTGCATCCGG
CTGACCAATG CGGACGTCGC CGATCTGTAT TCGCGGGTCA ATGTCGGCAC CAAGGTGGTG
GTGCTGCCGA TCGATCGCCG CGCCGACAGC GCCGACCGCA GCCGCGGCTG A
 
Protein sequence
MINFAGFKLA DRSRRYLASL AVLTIGVVAF AGPAQAAPLP LFPFLPLPML QQPMPPAPQA 
QIAPQDDDAV VRSELPARLK RQVVNYTTRE AQGTIVIDTA NTYLYLVLGN GRAMRYGIGV
GRDGFTWSGV QPITRKAEWP NWTPPAEMIA RQPYLPRFMA GGPGNPLGAR AMYLGGSIYR
IHGTNAPATI GTRVSSGCIR LTNADVADLY SRVNVGTKVV VLPIDRRADS ADRSRG