Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2168 |
Symbol | |
ID | 3971989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2360058 |
End bp | 2361428 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925276 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_532041 |
Protein GI | 90423671 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.531017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.677345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCTT CGCAGGAAAC GCAAAAGGGC AGCGGCATGA CGGAACTGGC GACGGCGGCC GAACGGCCGC ACCGCATCGT GGTGGCCGGC GGCGGTGCCG GCGGGCTCGA GCTGGTCACC AAGCTCGGCG ATACGCTGGG CAAGCAGGGC CTCGCCAAGG TGACCCTGGT GGAGCGCTCG CGCACCCATC TGTGGAAGCC GCTGCTGCAT TCGGTGGCGG CCGGCAGCCT GCGTCGCTCG CAGCACGAGT TGAACTATCT GGCGCAGGCG CATTGGCACA ATTTCGTCTA TCGCTACGGC GAGGTGGTCG GGCTCGACCG CGCCGAGAAG CAATTGAAGC TGGCGGCGAT GTTCGACGAG GAGGGCCGCG AGATCACGCC GGCCTCGTCG GTGCCCTACG ACACGCTGAT CATGGCGATC GGCAGCGTCA CCAATGATTT CGGCACCCCG GGCGCCGCCG AATTCGCGGT GCCGCTGGAA ACCCCCGAGC AGGCCAGCCG CTTCAACCGC CGCATCGTCA ACGCCTGCCT GCGCGCCAAT GCGCAGCCGG ATGGGCCGCG GCCCGGGCAG TTGCACATCG CCATCATCGG CGCCGGCGCC ACCGGCACCG AGCTTGCCGC CGAACTGCAC CACACCGTGC GCGACGTGGT CGGCTACGGC ATGGACCGCA TCGATCCGTC GCGCGACATC CACATCGTGC TGATCGAGGC GGGTCCGCGC ATTCTGCCGG CGCTGCCGGA GCGGATCTCG ATCGCCACCA AGGATCTGTT GAGCGAACTC GGCGTCGAGG TGCGCGCCAA CGCCCGCGTC GCCGAGGTGC GCGCCGACGG CGTGGTGCTG TCGAGCGGCG AGATGATCCC GTCCGAACTG GTGGTGTGGT CGGCCGGGGT CAAGGCGCCG GATTTTCTCG CCGACCTCGA CGGGCTGGAG ACCAACCGGA TCAATCAACT CGTCGTCAAT CCGACGCTGC AGACCACCCG CGATCCGCAG ATCTTCGCGA TCGGCGATTG CGCCTCATGC CCGCGCCCGG GCCATGACGC GCCGGTGCCG CCGCGGGCGC AAGCGGCGCA CCAGATGGCG ACCCACATCA TCCGCAACAT CGCGCCGATC ATGGCGGGGC AGCCGGTCCC GCCGTTCGAG TATCGCGATT TCGGCTCGCT GGTGTCGCTC GGCAAGTACT CCGCGGTCGG CAATCTGATG GGCTATGCGA TCGGCCGCAG CATGTTCATC GAGGGCATGT TCGCACGCCT GATGTATCGC TCGCTGTACA AGATGCACGA AGCGGCGCTG CACGGCCGCT CCACGGTGTT CTGGCGGGCG ATGCTGTCGA CCATCTCGCA GCGCCCGACG CCGAGCGTCA AGCTGCATTG A
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Protein sequence | MSASQETQKG SGMTELATAA ERPHRIVVAG GGAGGLELVT KLGDTLGKQG LAKVTLVERS RTHLWKPLLH SVAAGSLRRS QHELNYLAQA HWHNFVYRYG EVVGLDRAEK QLKLAAMFDE EGREITPASS VPYDTLIMAI GSVTNDFGTP GAAEFAVPLE TPEQASRFNR RIVNACLRAN AQPDGPRPGQ LHIAIIGAGA TGTELAAELH HTVRDVVGYG MDRIDPSRDI HIVLIEAGPR ILPALPERIS IATKDLLSEL GVEVRANARV AEVRADGVVL SSGEMIPSEL VVWSAGVKAP DFLADLDGLE TNRINQLVVN PTLQTTRDPQ IFAIGDCASC PRPGHDAPVP PRAQAAHQMA THIIRNIAPI MAGQPVPPFE YRDFGSLVSL GKYSAVGNLM GYAIGRSMFI EGMFARLMYR SLYKMHEAAL HGRSTVFWRA MLSTISQRPT PSVKLH
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