Gene RPC_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2167 
Symbol 
ID3971988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp2359407 
End bp2359970 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID637925275 
ProductPRC-barrel 
Protein accessionYP_532040 
Protein GI90423670 
COG category[S] Function unknown 
COG ID[COG1873] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.492056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.548798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCGA AATCCATCAC CGCCGGCCTG CTCGGCACCG CTTTGCTGGC GTCCGCCGCG 
GTCGCGCAGA CGCCGAGCGC CACCACCACC GCGCCCAGCG CGTCTGCGAC GTCGGCCTCC 
AGCATGTCGC ATCAGGGCCA ATGGCGCAGC TCGAAGCTGA TCGGTATCAA CGTCTACAAC 
AGCAACAACG AGAGCCTCGG CGAAATCAGC GAATTGCTGG TCGATCAGTC CGGCAAGATC 
CAGGCCGCGG TGATCGGCGT CGGCGGCTTC CTCGGCATGG GCGAGCGCAA CATCGCGATC 
CCGTTCGAGA AGATCAAGTG GGTGAATGAG CCGCTGCGCA GCGCCGCCGC CAACCGCCCG 
GCCGGCAGCG CCGCTACCGG CGACGCCGCG AGCGGCACGG CCGCCAGCGG CACCGGCACG 
GCGTCGTCCA CCACCACCGG CTCCTCGGCT TCCGGCTCGT CGGCGTCCAG CACGAGCGAC 
AAGCAGTGGT ATCCCGATCA TGCGGTGTTC AACGCCAGCA AGGACGAACT GAAGGCGATG 
CCGGAGTTCA AGTACTCGAC CTGA
 
Protein sequence
MFAKSITAGL LGTALLASAA VAQTPSATTT APSASATSAS SMSHQGQWRS SKLIGINVYN 
SNNESLGEIS ELLVDQSGKI QAAVIGVGGF LGMGERNIAI PFEKIKWVNE PLRSAAANRP 
AGSAATGDAA SGTAASGTGT ASSTTTGSSA SGSSASSTSD KQWYPDHAVF NASKDELKAM 
PEFKYST