| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2165 |
|---|
| Symbol | |
|---|
| ID | 3971986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2357884 |
|---|
| End bp | 2358081 |
|---|
| Gene Length | 198 bp |
|---|
| Protein Length | 65 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637925273 |
|---|
| Product | thiamine biosynthesis protein ThiS |
|---|
| Protein accession | YP_532038 |
|---|
| Protein GI | 90423668 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.433282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.219669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGA TCGTCAATGG CGAGCACGCC GAGGTTGCCG CTGCCCGCGT CGACGCGCTG
CTGAGCGAAC TCGACTACGC CGGCAGCCAC GTCGCGGTGG CGGTGAATTT CGAAGTGGTG
CCGCGCACCA AATGGGCCGA GACGCCGCTG AACAGCGGCG ACGAGATCGA GATCATCACC
CCGCGCCAGG GAGGCTGA
|
|---|
| Protein sequence | MRVIVNGEHA EVAAARVDAL LSELDYAGSH VAVAVNFEVV PRTKWAETPL NSGDEIEIIT
PRQGG
|
|---|
| |