| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2162 |
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| Symbol | |
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| ID | 3971983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2354093 |
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| End bp | 2356222 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925270 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_532035 |
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| Protein GI | 90423665 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.215518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC GGTCCAATCC CGACACCACG CTGCCCGCTG TGACCACCGG CCCGCTGCCC
TCCTCGCGCA AGATCTTCGC GACGCCCGAC GAAGCGCCGG AGCTGCGCGT GCCGTTGCGC
GAGATCATCC TCAGCGACGG CGCCGGCGAA CCGAACCTGC CGGTGTACGA CACCACCGGC
CCCTACACCG ATCCCAGCGT CACCATCGAC GTCAATGCCG GGCTGTCGCG GATCCGCACC
GCCTGGGTGA AAGAGCGCGG CGGCGTCGAG GAATATCAAG GCCGCGACGT CAAGCCGGAG
GACAACGGCA ATGTCGGCGC CGCCCACGCC GCAAAATCCT TCACCGCCTA TCACAAGCCG
CTGCGCGGAC TGGATGCGCC CGCCGCAGGC ACGGCGAACT CCCCTCCCCC TCGCGGGGAG
GGGTCGGGGG TGGGGGGAGC AACAAACACT GTGCCCTCCT CTACCCCCCT CCCCACCCCT
CCCCCGCAAG GGGGGAGGGA GCAAGGCATC GCCTATGCGT GCGGCCCACA CCTGCCGCCG
ATGGTGACGC AGCTGGAATT TGCCCGCGCA GGCATCATCA CCAAGGAGAT GATCTACGTC
GCCACCCGGG AAAACCTCGG CCGCAAACAG CAGCTCGCGC GCGCCGAGGC AGCGCTGGCC
GACGGCGAAT CGTTCGGCGC GTCGGTGCCG GCCTTCGTCA CCCCGGAATT CGTCCGCAGC
GAGATCGCGC GCGGCCGCGC GATCATCCCC GCCAACATCA ACCACGGCGA GTTGGAGCCG
ATGATCATCG GCCGCAATTT TCTCACCAAG ATCAACGCCA ATATCGGCAA CAGCGCTGTC
ACCTCCTCGG TCGAGGAAGA AGTCGACAAG ATGGTGTGGG CGATCCGCTG GGGCGCCGAC
ACCGTGATGG ACCTCTCCAC CGGCCGCAAC ATCCACACCA CGCGGGAATG GATTCTGCGC
AACGCGCCGA TCCCGATCGG CACCGTGCCG ATCTATCAGG CGCTGGAGAA GTGCGAAGGC
GATCCGGTCA AGCTCACTTG GGAGCTATAT CGCGACACGC TGGTCGAGCA ATGCGAACAG
GGCGTCGATT ACTTCACGAT CCACGCCGGC GTGCGGCTGG CTTACATCCA CCTCACCGCC
AACCGCACCA CCGGCATCGT GTCGCGCGGC GGCTCGATCA TGGCGAAGTG GTGCCTGGCG
CATCACCAGG AGAGCTTCCT CTACACGCAT TTCGACGAGA TCTGCGACCT GATGCGCAAA
TACGACGTGT CGTTCTCGCT CGGCGACGGC CTGCGGCCGG GCTCGATCGC GGATGCCAAC
GACCGCGCGC AATTCGCCGA ATTGGAGACG CTCGGCGAGC TCACCAAGAT CGCCTGGGAT
AAGGGCTGCC AGGTGATGAT CGAAGGCCCC GGCCATGTGC CGCTGCACAA GATCAAGATC
AACATGGACA AGCAGCTGAA AGAATGCGGC GAGGCGCCGT TCTATACGCT CGGGCCTTTG
ACAACAGACA TTGCGCCTGG CTACGACCAC ATCACCTCGG GCATTGGGGC GGCGATGATC
GGCTGGTTCG GCTGCGCGAT GCTGTGCTAC GTCACGCCGA AGGAACACCT TGGCCTGCCC
GATCGCAACG ACGTCAAGGT CGGGGTGATT ACTTACAAGA TCGCCGCCCA TGCCTCCGAT
CTCGCCAAGG GCCATCCGGC GGCGCAATTG CGCGACGACG CGCTGTCGCG CGCCCGCTTC
GACTTCCGCT GGCAGGATCA GTTCAACTTA GGCCTCGATC CCGACACCGC GCAGGCGTTC
CACGACGAGA CGCTGCCGAA GGACGCCCAC AAGGTGGCGC ATTTCTGCTC GATGTGCGGA
CCGAAATTCT GCTCGATGAA GATCACACAG GACGTGCGCG ACTACGCGGC GGGGCTTGGC
GACAACGAGA AGGCGGCGCT CAATCTGGCC GGCGGCAGCT CATTGGGCAG CGTCGGGATG
TCGATCTCCG GCAAGCTGGA AGACGGCCTG CCCGCCGACG CTTTTGCCAA GGCGGGCATG
GCGGAGATGA GCGAGAAGTT TCGGACTATG GGCGAGCAAC TCTATCTCGA CGCCGAGAAG
GTGAAGGAAA GCAACAAGGC GCTGTCGTAG
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| Protein sequence | MNIRSNPDTT LPAVTTGPLP SSRKIFATPD EAPELRVPLR EIILSDGAGE PNLPVYDTTG
PYTDPSVTID VNAGLSRIRT AWVKERGGVE EYQGRDVKPE DNGNVGAAHA AKSFTAYHKP
LRGLDAPAAG TANSPPPRGE GSGVGGATNT VPSSTPLPTP PPQGGREQGI AYACGPHLPP
MVTQLEFARA GIITKEMIYV ATRENLGRKQ QLARAEAALA DGESFGASVP AFVTPEFVRS
EIARGRAIIP ANINHGELEP MIIGRNFLTK INANIGNSAV TSSVEEEVDK MVWAIRWGAD
TVMDLSTGRN IHTTREWILR NAPIPIGTVP IYQALEKCEG DPVKLTWELY RDTLVEQCEQ
GVDYFTIHAG VRLAYIHLTA NRTTGIVSRG GSIMAKWCLA HHQESFLYTH FDEICDLMRK
YDVSFSLGDG LRPGSIADAN DRAQFAELET LGELTKIAWD KGCQVMIEGP GHVPLHKIKI
NMDKQLKECG EAPFYTLGPL TTDIAPGYDH ITSGIGAAMI GWFGCAMLCY VTPKEHLGLP
DRNDVKVGVI TYKIAAHASD LAKGHPAAQL RDDALSRARF DFRWQDQFNL GLDPDTAQAF
HDETLPKDAH KVAHFCSMCG PKFCSMKITQ DVRDYAAGLG DNEKAALNLA GGSSLGSVGM
SISGKLEDGL PADAFAKAGM AEMSEKFRTM GEQLYLDAEK VKESNKALS
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